Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04623 ATGATTCACAAAACCATGTCTTCTCCACTCTTCTCCCTCCTCTTCACAATATTCACTTTCTGGGTTTTCTTCACTTCATCCCAAGCTGAAGAAGACGACGTAAGATGCCTCCGAGGTATCAAAGAATCCCTAGGAAATTCCGAAAGTGGTATTTCATCATGGAGTTTCAACAACAACACCGTAGGTTTCATCTGTGATTTTGTTGGTGTCACTTGCTGGAACGTAAGAGAGAATCGAGTTTTGGGTTTGGAGCTAAAGGGTATGAATCTTAAGGGTAAGATCCCAGAATCCTTGAAGTATTGTGGACAAAACTTGCAAAGATTGGATCTTGGTTCAAATTCATTGAATTCTGTGATTCCAACACAGATCTGTAGTTGGATGCCGTTTTTGGTAACAATGGATTTGTCTAGTAATGATCTTTCAGGTTCAATTCCGAATACTCTTGTGAATTGTTCATATTTGAATGAGTTGATGTTATCTGATAATCATCTTAGTGGTAGAATACCTTATGAAATTGGTAGTTTAACTAGGCTTCATAAGTTTTCTGTTGCTAATAATCAGCTTAGTGGGAGTATTCCATCGTTTTTCAATGGTTTTGATAAGGATGGTTTTGAGGGGAATAGTGGTTTGTGTGGTGGTCCACTTGGTTCAAAGTGTGGGAGTATGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGTGTTTTCGGTGCGGCGGCTTCGTTGTTGTTGGCTTTTGGGTTATGGTGGTGGTATCATATTAGGTTGAGGAGGGAGAGGAGTAAGGAAGGGTATGTTGTTGGTGGTGTCGATGATTGGGCGTTGAGGTTGAGAGGTCATAAGCTTGCTCAGGTTAATCTTTTTCAGAAACCGATTGTGAAGGTTAAGCTTGGTGATTTGATGGCTGCGACGAATAATTTTAGTTCGGAGAATGTTTTGATTACGACGAGGACGGGTGCGACGTATAGGGCGGATTTGCCGGATGGTTCGACGCTTGCAGTGAAGAGGTTGAGTACTTGTAAGATCGGTGAGAAGCAGTTTAAGATTGAGATGGAACGGTTGGGAAAGGTTAGGCATCCGAATTTGGCGCCTTTGTTAGGGTATTGCGTTGTGGAAGAGGAGAAGCTTTTGGTTTACAAGCATATGTCGAACGGGACACTTTATTCGTTGTTGCATAAGAATAGCGGCGCGTTGGATTGGTTGATGAGGTTTAGGATAGGGTTGGGTGCGGCGAGGGGACTTGCGTGGTTGCATCATGGTTGTCATCCTCCGTTTATACAGCAGAATATTTGCTCTAATGTGATTCTTGTTGACGAAGAATTCGACGCTCGGATAATGGACTTCGGACTCGCGAGGCTTATGACAACTGACTCGAACGGTAGTTTTGTGAACGGCGATTTGGGGGAGCTCGGTTATATCGCTCCTGAGTATTCTAGTACGATGGTTGCTTCGGTGAAAGGAGATGTGTATGGATTCGGAGTTTTGCTTTTGGAGTTGGTCACAGGGTGCAAACCTCTCGAGGTGAAGCGTGGCGATGAAGAATTTAAGGGTAACCTGGTGGATTGGGTGAATGTGCAGTCTAGTTCAGGTAGACTCAAGGATTGCATCGACAAAGCGATATGTGGAAAAGGTAACGACGAGGAGATTCTGGAGTTTCTGAAAATCGCATCCAAATGTATCGTTACTCGCCCGAAAAATAGGTGTTCTATGTATGAAGTTTATCATTCATTGAAAACCATTTCCAAAGACAATAGCTTCTCCGAACAAGATGATGAATTTCCATTGATCTTCGATAAGCCAGAAAATGAACCGTCAAAGTTCGTGCACTAG 1830 0.4284 MIHKTMSSPLFSLLFTIFTFWVFFTSSQAEEDDVRCLRGIKESLGNSESGISSWSFNNNTVGFICDFVGVTCWNVRENRVLGLELKGMNLKGKIPESLKYCGQNLQRLDLGSNSLNSVIPTQICSWMPFLVTMDLSSNDLSGSIPNTLVNCSYLNELMLSDNHLSGRIPYEIGSLTRLHKFSVANNQLSGSIPSFFNGFDKDGFEGNSGLCGGPLGSKCGSMSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHIRLRRERSKEGYVVGGVDDWALRLRGHKLAQVNLFQKPIVKVKLGDLMAATNNFSSENVLITTRTGATYRADLPDGSTLAVKRLSTCKIGEKQFKIEMERLGKVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLYSLLHKNSGALDWLMRFRIGLGAARGLAWLHHGCHPPFIQQNICSNVILVDEEFDARIMDFGLARLMTTDSNGSFVNGDLGELGYIAPEYSSTMVASVKGDVYGFGVLLLELVTGCKPLEVKRGDEEFKGNLVDWVNVQSSSGRLKDCIDKAICGKGNDEEILEFLKIASKCIVTRPKNRCSMYEVYHSLKTISKDNSFSEQDDEFPLIFDKPENEPSKFVH 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04623 609 Gene3D Transferase(Phosphotransferase) domain 1 382 603 - -
Vivi2g04623 609 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 269 381 - -
Vivi2g04623 609 Pfam Protein tyrosine and serine/threonine kinase 329 576 IPR001245 GO:0004672|GO:0006468
Vivi2g04623 609 Gene3D Phosphorylase Kinase; domain 1 269 381 - -
Vivi2g04623 609 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 83 579 - -
Vivi2g04623 609 FunFam Nuclear pore complex protein NUP107 30 194 - -
Vivi2g04623 609 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 382 591 - -
Vivi2g04623 609 SUPERFAMILY L domain-like 32 200 - -
Vivi2g04623 609 ProSiteProfiles Protein kinase domain profile. 307 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g04623 609 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Vivi2g04623 609 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Vivi2g04623 609 SUPERFAMILY Protein kinase-like (PK-like) 287 577 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04623 Vivi-Chr2 162740400 162742668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04623 4 603 Receptor kinase-like Gene Family AT3G28450 61.842 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Vivi2g04623 PK_Tyr_Ser-Thr 3.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04623 - - gmx:100810378 910.598