Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04596 ATGGATGTAGTTCTAAGCAGCCTAATAAAAACCACAACAATCGCATTCCTAATTTCTCTAATTCCATTAGGTTTGTTTCTATTTGTTCATAGAAAAAAAAGAGAGGCACCAATAGCAAAAGGTGCATGGCCAATACTTGGTCACCTCCCCATTTTCAATGGCACACAATCACCTCATAGAGTCTTAGGTACCTTAGCTGATAAATATGGACCAATATTCACCATCAAACTTGGTTCAAAACATGCTTTAATCATCAACAATTGGGAAATGGCTAAGGAATGTTTCACTACAAATGACATGGCTCTTTCATCTCGTCCCAAGCTTGTTGCAACACAACATTTGGGCTATAAAGGAGCCATGTTTGGACTTGCACCCTATGGTCCTTATTGGCGCAATCTTCGCAAGATTGCAACCCTAGAGATTCTCACGAATCGTCGAGTCGAACAACAACAACATATTCGTGTTTCCGAAGTACAAACATCGATTAAAGAGCTCTTCGATGTTTGGTCTAGCAAAAGAAACGAGCACAATTCATCAAACTATGTGTTGGTGGATATGAAGCAGTGGTTTACACACTTAACATTCAACATGGTTCTTCGAATGGTTGTTGGAAAGAGATATTTTGGTGTAAGAACTAATGTTGATGAAGAAGAAGCTCAAAGAAGTGTGAAAGCTTTGAAGGAGATGATGCGTTTGTTTGGGGTGATTACGGTGGGAGATGTTATTCCTTGTTTGAAATTGTTTGATTTTGGTGGTCATGTGAAGGCCATGAAAAGAACTTTAAAGGAGTTGGATGAAGTTTTAGGTGAGTGGTTGAAGGAGCGTCGTCATGAAAGGAGTTTGAGTGAAAAGGTTGATGGTGACGATAATAAAGACATCATGGATGTGTTGCTTTCATTGCTTGATGGAAAAACAATTGAAGGGTTTGACTGTGATACCATAATCAAAGCCACAATATTGACATTGTTTACCGGAGGAACTGACAGTAGTAGTGTAACTCTTACATGGGCACTATGTTTACTATTGAAAAATCCTCTTGCAATGAAAAAGGCCAAAGAAGAACTTGACACACATATTGGTAAAGAGAGACATGTAAACGAATCAGATATAAGTAAGTTGGTATACATTCAAGCTATAGTCAAAGAAACTCTAAGATTGCATCCACCTGCACCTCTATCGGGACCTCACGAATTCTCCGAGAATTGTACCCTAGGTGGCTATCATGTTAAAAAGGGAACTCGATTAATCACGAATCTTTGGAAGATCCATACCGATCCTAATGTTTGGCCTGATCCGTTAGAGTTCAGGCCAGAAAGATTTCTCACTACTCATAAAAATGTTGATGTTAGAGGTAAATATTTTGAGTTATTACCATTTGGAAGTGGTAGAAGGATGTGTCCTGGAATATCTTTTGGACTTCAAATGGTGCATTACTCTCTAGCTAGCTTTTTGCATTCGTTTGATATCTTAAATCCAACAACATCTGAACTTGTTGATATGACTGAAGTGTTTGGATTAACAAATAGTAAAGCTACTCCCCTTGAGGTTCTTGTTAAACCACGTTTGTCCCTTAGTTGTTATGAAATTATGTAA 1593 0.3823 MDVVLSSLIKTTTIAFLISLIPLGLFLFVHRKKREAPIAKGAWPILGHLPIFNGTQSPHRVLGTLADKYGPIFTIKLGSKHALIINNWEMAKECFTTNDMALSSRPKLVATQHLGYKGAMFGLAPYGPYWRNLRKIATLEILTNRRVEQQQHIRVSEVQTSIKELFDVWSSKRNEHNSSNYVLVDMKQWFTHLTFNMVLRMVVGKRYFGVRTNVDEEEAQRSVKALKEMMRLFGVITVGDVIPCLKLFDFGGHVKAMKRTLKELDEVLGEWLKERRHERSLSEKVDGDDNKDIMDVLLSLLDGKTIEGFDCDTIIKATILTLFTGGTDSSSVTLTWALCLLLKNPLAMKKAKEELDTHIGKERHVNESDISKLVYIQAIVKETLRLHPPAPLSGPHEFSENCTLGGYHVKKGTRLITNLWKIHTDPNVWPDPLEFRPERFLTTHKNVDVRGKYFELLPFGSGRRMCPGISFGLQMVHYSLASFLHSFDILNPTTSELVDMTEVFGLTNSKATPLEVLVKPRLSLSCYEIM 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04596 530 Coils Coil 254 274 - -
Vivi2g04596 530 CDD CYP82 70 521 - -
Vivi2g04596 530 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 SUPERFAMILY Cytochrome P450 27 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 Gene3D Cytochrome P450 29 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PANTHER CYTOCHROME P450 82C3-RELATED 26 527 - -
Vivi2g04596 530 Pfam Cytochrome P450 42 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 FunFam Cytochrome P450 82C4 28 519 - -
Vivi2g04596 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Vivi2g04596 530 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04596 530 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04596 Vivi-Chr2 162130280 162133820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04596 20 522 Cytochrome P450 AT4G31940 47.876 4.16e-175 502