LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g04596	ATGGATGTAGTTCTAAGCAGCCTAATAAAAACCACAACAATCGCATTCCTAATTTCTCTAATTCCATTAGGTTTGTTTCTATTTGTTCATAGAAAAAAAAGAGAGGCACCAATAGCAAAAGGTGCATGGCCAATACTTGGTCACCTCCCCATTTTCAATGGCACACAATCACCTCATAGAGTCTTAGGTACCTTAGCTGATAAATATGGACCAATATTCACCATCAAACTTGGTTCAAAACATGCTTTAATCATCAACAATTGGGAAATGGCTAAGGAATGTTTCACTACAAATGACATGGCTCTTTCATCTCGTCCCAAGCTTGTTGCAACACAACATTTGGGCTATAAAGGAGCCATGTTTGGACTTGCACCCTATGGTCCTTATTGGCGCAATCTTCGCAAGATTGCAACCCTAGAGATTCTCACGAATCGTCGAGTCGAACAACAACAACATATTCGTGTTTCCGAAGTACAAACATCGATTAAAGAGCTCTTCGATGTTTGGTCTAGCAAAAGAAACGAGCACAATTCATCAAACTATGTGTTGGTGGATATGAAGCAGTGGTTTACACACTTAACATTCAACATGGTTCTTCGAATGGTTGTTGGAAAGAGATATTTTGGTGTAAGAACTAATGTTGATGAAGAAGAAGCTCAAAGAAGTGTGAAAGCTTTGAAGGAGATGATGCGTTTGTTTGGGGTGATTACGGTGGGAGATGTTATTCCTTGTTTGAAATTGTTTGATTTTGGTGGTCATGTGAAGGCCATGAAAAGAACTTTAAAGGAGTTGGATGAAGTTTTAGGTGAGTGGTTGAAGGAGCGTCGTCATGAAAGGAGTTTGAGTGAAAAGGTTGATGGTGACGATAATAAAGACATCATGGATGTGTTGCTTTCATTGCTTGATGGAAAAACAATTGAAGGGTTTGACTGTGATACCATAATCAAAGCCACAATATTGACATTGTTTACCGGAGGAACTGACAGTAGTAGTGTAACTCTTACATGGGCACTATGTTTACTATTGAAAAATCCTCTTGCAATGAAAAAGGCCAAAGAAGAACTTGACACACATATTGGTAAAGAGAGACATGTAAACGAATCAGATATAAGTAAGTTGGTATACATTCAAGCTATAGTCAAAGAAACTCTAAGATTGCATCCACCTGCACCTCTATCGGGACCTCACGAATTCTCCGAGAATTGTACCCTAGGTGGCTATCATGTTAAAAAGGGAACTCGATTAATCACGAATCTTTGGAAGATCCATACCGATCCTAATGTTTGGCCTGATCCGTTAGAGTTCAGGCCAGAAAGATTTCTCACTACTCATAAAAATGTTGATGTTAGAGGTAAATATTTTGAGTTATTACCATTTGGAAGTGGTAGAAGGATGTGTCCTGGAATATCTTTTGGACTTCAAATGGTGCATTACTCTCTAGCTAGCTTTTTGCATTCGTTTGATATCTTAAATCCAACAACATCTGAACTTGTTGATATGACTGAAGTGTTTGGATTAACAAATAGTAAAGCTACTCCCCTTGAGGTTCTTGTTAAACCACGTTTGTCCCTTAGTTGTTATGAAATTATGTAA	1593	0.3823	MDVVLSSLIKTTTIAFLISLIPLGLFLFVHRKKREAPIAKGAWPILGHLPIFNGTQSPHRVLGTLADKYGPIFTIKLGSKHALIINNWEMAKECFTTNDMALSSRPKLVATQHLGYKGAMFGLAPYGPYWRNLRKIATLEILTNRRVEQQQHIRVSEVQTSIKELFDVWSSKRNEHNSSNYVLVDMKQWFTHLTFNMVLRMVVGKRYFGVRTNVDEEEAQRSVKALKEMMRLFGVITVGDVIPCLKLFDFGGHVKAMKRTLKELDEVLGEWLKERRHERSLSEKVDGDDNKDIMDVLLSLLDGKTIEGFDCDTIIKATILTLFTGGTDSSSVTLTWALCLLLKNPLAMKKAKEELDTHIGKERHVNESDISKLVYIQAIVKETLRLHPPAPLSGPHEFSENCTLGGYHVKKGTRLITNLWKIHTDPNVWPDPLEFRPERFLTTHKNVDVRGKYFELLPFGSGRRMCPGISFGLQMVHYSLASFLHSFDILNPTTSELVDMTEVFGLTNSKATPLEVLVKPRLSLSCYEIM	530

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g04596	530	Coils	Coil	254	274	-	-
	Vivi2g04596	530	CDD	CYP82	70	521	-	-
	Vivi2g04596	530	PRINTS	E-class P450 group I signature	377	395	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi2g04596	530	PRINTS	E-class P450 group I signature	456	466	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi2g04596	530	PRINTS	E-class P450 group I signature	90	111	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi2g04596	530	PRINTS	E-class P450 group I signature	193	211	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi2g04596	530	PRINTS	E-class P450 group I signature	466	489	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi2g04596	530	PRINTS	E-class P450 group I signature	334	360	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi2g04596	530	PRINTS	E-class P450 group I signature	418	442	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi2g04596	530	PRINTS	E-class P450 group I signature	314	331	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g04596	Vivi-Chr2	162130280	162133820	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g04596	20	522	Cytochrome P450	AT4G31940	47.876	4.16e-175	502

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g04596	-		-	gmx:100805047	726.857

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