Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04595 ATGGTTCTTTCAACACCACAATCAATCTTATCAATTTCTAACTTCAACCAATCCAACCACAAAAATATGGATTTTGTCCTAAACTATCTTGACACCACTACCATAGCATTCATTTCTCTAATTTCCCTCCTTTTCTTTCTATTTCGTTTTTCCAAAGTTTCTCATACAAAAGAGCCTCCTACAATTTCAGGGTCATGGCCTTTACTAGGTCACCTTCCTCTAATGAGAAATACACAAACACCCCACAAAACCTTAGGTTCCTTAGTTGATAAATATGGACCTATATTCACAATCAAGCTTGGTGCTACAAATGCTTTGGTACTAAGCAATTGGGAATTAGCCAAAGAATGTTTCACTAAAAACGACATTGTCGTTTCGTCGCGTCCGAAGCCCGTCGCAGTCGAGCTTATGTCGTATAATCAAGCTTTCATTGGTTGGGCACCATATGGTGCATATTGGCGTCAATTAAGAAAAATTGTTACATTAGAGATTCTCTCTAATCGAAGAGTTGAACTTCTAAGTCACATTCGTGTCTCTGAAGTTCAAACATCGATTAAAGAGCTTGTTAATGTCTGGTCAAATCAAGTGTCACTACAACCCATATTGCTCGATGACACTAAGTCGTCTAGTACTAACGACTATGTGTCGGTCGAGTTGAAGAAATGGTTTGCACAATTGACATTAAACATGGTACTAAGAATGGTTGTTGGGAAGAGATGTTTTGGTGATGTGGATGAGGCAAACAAGGAAGAAGCAAAGAGATTTTTGGAAAATATAAGAGATTTTATGCGTTTGATTGGAACATTTACAGTGGGAGATGGTGTACCATTTTTAAAGTGGCTGGATTTAGGAGGTCATGAAAAGCAAATGAAAAAATGTGCAAAGAAATTTGATGAAATGTTGAATGAGTGGTTGGAAGAGCATCGTGAAAAGAAGGGTTTAGGTAGTGATGACAAGGTTGTGGGGGAAAGAGATTTCATGGATGCAATGCTTTTGGTGCTTAAAGACAAACCAATTGAGGAGTTTGATGTAGATACCATAATCAAAGCCACAACATTGGAGTTGATTCTAGGAGGAAGTGACACAACCGCAGGAACACTTACATGGGCAATGTGTCTTCTATTAAAACATCCTCATGTCTTAGAAAAAGCAAAAGAAGAACTTAACACGCACATTGGTAAAGAAAGGTGTGTAAGTGAATTAGATATCAATAAATTAGTATATCTTCATGCTATAATCAAAGAAACACTAAGATTATATCCACCGGCGCCATTTTCATCACCTCGCGAATTCACCAAAGATTGCACAATAGGCGGATACCATATCAAAAAGGGAACTCGATTGATGCCGAATTTATGGAAAATTCATAGAGATCCTAGTGTTTGGCCAGATCCATTAGAGTTCAAACCCGAAAGGTTTCTTACCACTCACAAAGATGTTGATGTTAGGGGTCAAAATTTTGAGTTGTTGCCATTTGGAAGTGGGAGAAGAATGTGTGCTGGAATGTCCCTTGGTTTGCATATGGTTCATTATATTCTTGCTAATTTCTTGCATTCTTTTGAAATCTTGAATCCATCTCCTGAGTCAATTGATTCGACTGAAGTTCTTGAATTTGTCAGCACTAAAGCTACTCCACTTGAGGTTTTGGTTAAACCTTGTTTGTCTTTCAAATGTTATGAAACTATGTGA 1689 0.3766 MVLSTPQSILSISNFNQSNHKNMDFVLNYLDTTTIAFISLISLLFFLFRFSKVSHTKEPPTISGSWPLLGHLPLMRNTQTPHKTLGSLVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSNRRVELLSHIRVSEVQTSIKELVNVWSNQVSLQPILLDDTKSSSTNDYVSVELKKWFAQLTLNMVLRMVVGKRCFGDVDEANKEEAKRFLENIRDFMRLIGTFTVGDGVPFLKWLDLGGHEKQMKKCAKKFDEMLNEWLEEHREKKGLGSDDKVVGERDFMDAMLLVLKDKPIEEFDVDTIIKATTLELILGGSDTTAGTLTWAMCLLLKHPHVLEKAKEELNTHIGKERCVSELDINKLVYLHAIIKETLRLYPPAPFSSPREFTKDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLTTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDSTEVLEFVSTKATPLEVLVKPCLSFKCYETM 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04595 562 FunFam Cytochrome P450 82C4 49 551 - -
Vivi2g04595 562 SUPERFAMILY Cytochrome P450 60 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PANTHER CYTOCHROME P450 82C3-RELATED 39 559 - -
Vivi2g04595 562 Gene3D Cytochrome P450 53 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS P450 superfamily signature 358 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS P450 superfamily signature 490 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 492 501 IPR017972 GO:0005506|GO:0016705
Vivi2g04595 562 Pfam Cytochrome P450 65 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 CDD CYP82 93 553 - -
Vivi2g04595 562 PRINTS E-class P450 group I signature 499 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS E-class P450 group I signature 451 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS E-class P450 group I signature 367 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS E-class P450 group I signature 489 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS E-class P450 group I signature 113 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04595 562 PRINTS E-class P450 group I signature 347 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04595 Vivi-Chr2 162102982 162105105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04595 30 552 Cytochrome P450 AT4G31940 44.925 6.07e-165 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04595 - - gmx:100789386 703.745