Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04580 ATGAATGTCCCAAACTTGACCAGGGAAAATGTAGCTAGCCACTTACAGAAATATCGCAAATTTCTGCGTGATGTCAATGAGAAAGGAATGATCGGAGGAATATCACAAAGAGCATTAAGATCTAGGTTTGCATCAAGTCTTCCCATGTCATTAATAAAGACTATGCAAGAAAAAAGAGCAAACAAGTTTCACACCCCAACTTTTGAAAATTTGCAAACATTATCATATCAAACCGAAAATCAAAACAATTATTTTAACCTTTTCAATAGATTTCCATCGCGCCAAATTAATAATTTCCCTTATGTACAAAAAGCCCCAAATCTTCAATATTTGAATCAATTTAGTCTTGAAAAATCAAATTTGGAACCTAATATTGGTTCGAACAATAGTATCTATGACCAAAATCCAATTGGAATAAACTCTTCGAATAGTTCATTTTTTCCGGTAAAGAATCTATTATATGATGGCGGCTCTAGTTCTAGTAGCTTTTCATCATCTGGAGGTGGACAAGGATGGACTACTTCTTCAACAACTTCATCTTCAAGTTTCTTAACAAGAGACTTGAACTTCAATGACATGAGTCTTGATAATAAGTCATTCAAAGGTGGTAATGAAATCTCTCCTCAAGCTGAAATCACATCATGTAGGATGAAAGAGTTACCAATAAGTTCAAATGAAAGTTCTAAAAAGTTGCAAGGAAATAATGGATTTTCAAATGAGGGATCATCTGATAGATTTACAAGAGACAAAGAGTCTAAAAAAAGTACATCAACTAATGATCTGGAATTTGATATGGATATTGTTGAAGCCTTGTTTGGTACTATAGACGACTAA 834 0.3333 MNVPNLTRENVASHLQKYRKFLRDVNEKGMIGGISQRALRSRFASSLPMSLIKTMQEKRANKFHTPTFENLQTLSYQTENQNNYFNLFNRFPSRQINNFPYVQKAPNLQYLNQFSLEKSNLEPNIGSNNSIYDQNPIGINSSNSSFFPVKNLLYDGGSSSSSFSSSGGGQGWTTSSTTSSSSFLTRDLNFNDMSLDNKSFKGGNEISPQAEITSCRMKELPISSNESSKKLQGNNGFSNEGSSDRFTRDKESKKSTSTNDLEFDMDIVEALFGTIDD 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04580 277 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 234 IPR044841 GO:0003700|GO:0006355
Vivi2g04580 277 MobiDBLite consensus disorder prediction 224 242 - -
Vivi2g04580 277 Gene3D - 1 25 - -
Vivi2g04580 277 MobiDBLite consensus disorder prediction 243 260 - -
Vivi2g04580 277 MobiDBLite consensus disorder prediction 224 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04580 Vivi-Chr2 161870308 161872213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04580 1 43 Response Regulator Gene Family AT5G07210 62.791 4.27e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi2g04580 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04580 - - vvo:131650473 506.523