Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04552 ATGGTTCCTCCTCCACTGAGTTTCTCCATAATATGCAAAAGTATGCTTCTTGGGGCAATAGGATGTGGATCTCAGATTTTGGGGTATATTAGTATTAATTATAGTTCTCCAACGCTTGCTTCAGCAATTGCTAATTTGGTACCTGCTTTCACTTTCATGCTAGCGGTTACTTTCAGGATGGAAAAGTTAGCTTTAAAGAGTAGAAGTAGTAATGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGTGCCTTTGTCTTAACTTTCTACAAAGGACCATCCATCTGGAATTCTTCTTTACTTCATCAACCAAATGAATTTCTCAAGTCAGTGGATTCAAGTTGGGCCATTGCTGGCATTCTGCTAATAGTCGACTATTTTCTGGTTTCTCTATGGTACATTTTTCAGGTACATATCTTGAAGGAGTTCCCAGATGAACTAACTTTAGTCTTGTTATACTCCATAAGTGCAACCATCATATCGACAGTTGTAGCTTTGATATCAGTTCCAAATGCAAGTGCTTGGAAAATAGGATTAAATCTCTCACTCATCTCCATTGTTTCCTCTGGAATTTTCGGAAAGTTAATAGGCAATATAGTTTCTGCATGGTCAATTCACTTAAAGGGAGCTGTTTATGTAACTTCATTCAAACCACTGCAAATTGTTATTTCTGTTGGCTTGGGTGTTATATTCCTTGGTGATTCTCTTTATGTTGGAAGTATAATTGGAGCCGCAATAATCTCAATTGGCCTTTATGGTGTATTATGGGGAAAAGCAACAGAAGAGATAGAGGAGGATGTTGGTTTCCTAGATTCACCATCTACAGAGAATGCACCTCTGTTGCAAAGTTATATACCTCAAACATTCGAAAAGAAAATAGATGGAAATGTATAA 894 0.3725 MVPPPLSFSIICKSMLLGAIGCGSQILGYISINYSSPTLASAIANLVPAFTFMLAVTFRMEKLALKSRSSNAKVMGSIISIAGAFVLTFYKGPSIWNSSLLHQPNEFLKSVDSSWAIAGILLIVDYFLVSLWYIFQVHILKEFPDELTLVLLYSISATIISTVVALISVPNASAWKIGLNLSLISIVSSGIFGKLIGNIVSAWSIHLKGAVYVTSFKPLQIVISVGLGVIFLGDSLYVGSIIGAAIISIGLYGVLWGKATEEIEEDVGFLDSPSTENAPLLQSYIPQTFEKKIDGNV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04552 297 SUPERFAMILY Multidrug resistance efflux transporter EmrE 163 258 - -
Vivi2g04552 297 PANTHER WAT1-RELATED PROTEIN 6 267 IPR030184 GO:0016020|GO:0022857
Vivi2g04552 297 SUPERFAMILY Multidrug resistance efflux transporter EmrE 5 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04552 Vivi-Chr2 160905150 160908192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04552 4 284 Nodulin-like Gene Family AT3G28050 49.324 5.97e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04552 - - tpra:123906528 478.404