Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04551 ATGAGAAGAAGATGGTCCTTTTACATGGATATTTTGCCAGTTTTTGTGATTATAGGCAATGAATTTATTGACATGGGTTTACTCACTTTGTTCAAAGCAGCAACACTACAAGGAATGAACAATCATGTCTTTATTGCTTATGCTTATGCTCTTGGTACTCTTGTTCTTCTTCCTGTCACTCTTTTCACTAGAAGATCAAGAATGGTTCCTCCTCCACTGAGTTTCTCCATAATATGCAAAAGTATGCTTCTTGGGGCAATAGGATGTGGATCTCAGATTTTGGGGTATATTAGTATTAATTATAGTTCTCCAACGCTTGCTTCAGCAATTGCTAATTTGGTACCTGCTTTCACTTTCATGCTAGCGGTTACTTTCAGGATGGAAAAGTTAGCTTTAAAGAGTAGAAGTAGTAATGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGTGCCTTTGTCTTAACTTTCTACAAAGGACCATCCATCTGGAATTCTTCTTTACTTCATCAACCAAATGAATTTCTCAAGTCAGTGGATTCAAGTTGGGCCATTGCTGGCATTCTGCTAATAGTCGACTATTTTCTGGTTTCTCTATGGTACATTTTTCAGGTACATATCTTGAAGGAGTTCCCAGATGAACTAACTTTAGTCTTGTTATACTCCATAAGTGCAACCATCATATCGACAGTTGTAGCTTTGATATCAGTTCCAAATGCAAGTGCTTGGAAAATAGGATTAAATCTCTCACTCATCTCCATTGTTTCCTCTGGAATTTTCGGAAAGTTAATAGGCAATATAGTTTCTGCATGGTCAATTCACTTAAAGGGAGCTGTTTATGTAACTTCATTCAAACCACTGCAAATTGTTATTTCTGTTGGCTTGGGTGTTATATTCCTTGGTGATTCTCTTTATGTTGGAAGTATAATTGGAGCCGCAATAATCTCAATTGGCCTTTATGGTGTATTATGGGGAAAAGCAACAGAAGAGATAGAGGAGGATGTTGGTTTCCTAGATTCACCATCTACAGAGAATGCACCTCTGTTGCAAAGTTATATACCTCAAACATTCGAAAAGAAAATAGATGGAAATGTATAA 1095 0.3689 MRRRWSFYMDILPVFVIIGNEFIDMGLLTLFKAATLQGMNNHVFIAYAYALGTLVLLPVTLFTRRSRMVPPPLSFSIICKSMLLGAIGCGSQILGYISINYSSPTLASAIANLVPAFTFMLAVTFRMEKLALKSRSSNAKVMGSIISIAGAFVLTFYKGPSIWNSSLLHQPNEFLKSVDSSWAIAGILLIVDYFLVSLWYIFQVHILKEFPDELTLVLLYSISATIISTVVALISVPNASAWKIGLNLSLISIVSSGIFGKLIGNIVSAWSIHLKGAVYVTSFKPLQIVISVGLGVIFLGDSLYVGSIIGAAIISIGLYGVLWGKATEEIEEDVGFLDSPSTENAPLLQSYIPQTFEKKIDGNV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04551 364 Pfam EamA-like transporter family 23 155 IPR000620 GO:0016020
Vivi2g04551 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Vivi2g04551 364 PANTHER WAT1-RELATED PROTEIN 12 334 IPR030184 GO:0016020|GO:0022857
Vivi2g04551 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04551 Vivi-Chr2 160904786 160908192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04551 1 351 Nodulin-like Gene Family AT3G28050 48.907 5.55e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04551 - - tpra:123906528 593.578