Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04546 ATGAGAAAAAGATGGTCTTTTTACATGGATTTTCTACCAGTTATTGTGATTATAAGCTTTGAATGTGTTGACATGGCTTTACTCGCTTTATTCAAAGCAGCAACACTTCAAGGGATGAACAATCATGTCTTTATTGCCTATGCTTATGTTGTTGGTACTTGTGTTCTCTTACCTGTCACTCTTTTCACCAGAAGAGCAAGAGTGGTTCCTCCACTTACTTTCTCCATAATATGGAAAAGTATGCTTCTTGGAGCATTAGGAAGTGGATCTCAAATTCTGGGTTATATTGGTATTAATTATAGTTCTCCAACACTTTCTTCAGCAATTGCTAATCTGGTACCTGCTTTCACTTTCATGCTGGCTGTCACTTTCAGGATGGAAAAGTTAGCTTTGAAGAGTAGAAGTAGTAATGCTAAAGTAGTGGGAAGCATAATATCAATAGCAGGTGCTTTTGTATTGACTTTTTACAAAGGAAAATCCATCTTGAATTCCTCACCACTTCATCAACCAATTGGCTTTCTCAACTCAGTGGATTCAAGTTGGGCCATTGCTGGCATTATTCTAACAGTTGACTACTTTCTGCTTTCACTATGGTATATATTACAGGTACATATCTTGAAAGAGTTCCCAGATGAACTAACTTTAGTCTTGTTATATTCAACAACTGCAACCATCATATCAATAGTTGTAGCTTTGTTATCAGTTCCAAATGCAAGTGCTTGGAAAATAGGACTAAATCTCTCACTCATCTCCATTGTTTCTTCTGGAATATTTGGAAAGTTAGTAGGCAATCTAATTTACGCCTGGTCAGTTCACTTAAAGGGGGCTGTCTATGTAACATCATTCATGCCACTCCAAATTGCTATTTCTGTTATCTTGGGAGTTATATTCCTTGGTGATACACTTCATATTGGAAGTATAATTGGAGCCATAATCATCTCAATTGGCCTTTATGGTGTATTATGGGGCAAAGCAACAGAAGAGATAGAGGAAGATGTTGATAGTCTGCAGTCACCATCTACATCTACTGAGAATGCACCTCTGTTGCTAAATTATGGAACTCAAACTTTTGAAAAGAAAATAGATGGAAATGTATAA 1098 0.367 MRKRWSFYMDFLPVIVIISFECVDMALLALFKAATLQGMNNHVFIAYAYVVGTCVLLPVTLFTRRARVVPPLTFSIIWKSMLLGALGSGSQILGYIGINYSSPTLSSAIANLVPAFTFMLAVTFRMEKLALKSRSSNAKVVGSIISIAGAFVLTFYKGKSILNSSPLHQPIGFLNSVDSSWAIAGIILTVDYFLLSLWYILQVHILKEFPDELTLVLLYSTTATIISIVVALLSVPNASAWKIGLNLSLISIVSSGIFGKLVGNLIYAWSVHLKGAVYVTSFMPLQIAISVILGVIFLGDTLHIGSIIGAIIISIGLYGVLWGKATEEIEEDVDSLQSPSTSTENAPLLLNYGTQTFEKKIDGNV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04546 365 Pfam EamA-like transporter family 193 321 IPR000620 GO:0016020
Vivi2g04546 365 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020
Vivi2g04546 365 PANTHER WAT1-RELATED PROTEIN 12 335 IPR030184 GO:0016020|GO:0022857
Vivi2g04546 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Vivi2g04546 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04546 Vivi-Chr2 160857170 160860971 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04546 4 352 Nodulin-like Gene Family AT3G28050 46.260 3.11e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04546 - - tpra:123906528 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04546 2 160857170 160860971 Vivi2g04546 2 160857170 160860971 ECH