Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04539 ATGATCAAGTTTGCAACAAGCAAATTTATAACCATTTGTATAATTTTTCTTCTTCAACAAAGCTTAGTTTGTTCAGAATGTAGCTGTGAAAATGAAGAACAAGATTCTAATCATAAAGTATCTGAGGCATTGAAATACAAAATAATTGCTATGGCAACAGTTTCGGTTTCTAGCTTAATTGGTGTGTGTATTCCAATCTTTGCAAAAAGAATTTCATATTTAAATCCGGAGAATGATTTTTATTTCTTGATTAAAGCATTTGCAGCTGGAGTGATTTTAGCGACCGGGTTCATACACATACTTCCCGATGCTTTCGAGGCCTTATCGAGTCCTTGTATAGGCGAAAAGCCGTGGAAACTGTTTCCTTTCTCGAGTTTTGTTACAATGGTGACAGCCATTGGAACATTAATTATGGAAGCTTTGATTATTGGATACAAAAAGAGATCTGAAATGAAAAAACCTCAACCATTGGCTGAGGATGTTGAAATTCATGAAGCTAATGATAATAGTAATCATGTTCATAACTTCGAACTTGCATCCGATAAATTAGATTCAACAAATCGTCTTCGGTATATCATAGTTTCTCAGATTTTGGAGCTAGGTATTGTGTTGCATTCAGTCATTTTAGGGATATCTCTTGGTGTGTCAAGAAGTGCTAAAACAATCAAACCTTTAGTGGCTGTATTAACAATTCATCAATGCTTTGAAGGAATAGGACTTGGTGGCTGCATTTCTCAGGCACAATTCAAATATTCTAAGGTTGCAATCATGGTACTATTCTTTTGTCTAATTTTTCCAATTGGAATTGGAATTGGCATTGGAATATCAGATATCTACAATGCAAATAGTCCAAAGGCATTAATAATTGAAGGGTTTCTTCTATCAGCATCTGCAGGGGTTCTTATTAACATGGCACTTGTTGATCTTATTGCTGCTGATTTCTTGAACTCAAAAATGCTAAGAAGTTTTAGGCTACAACTTGGTGCAAGTTTAGCACTTTTTGTTGGGTTGATTTGTATGTCAATTTTGGCAATAATGGAAAATTTCTAG 1050 0.3457 MIKFATSKFITICIIFLLQQSLVCSECSCENEEQDSNHKVSEALKYKIIAMATVSVSSLIGVCIPIFAKRISYLNPENDFYFLIKAFAAGVILATGFIHILPDAFEALSSPCIGEKPWKLFPFSSFVTMVTAIGTLIMEALIIGYKKRSEMKKPQPLAEDVEIHEANDNSNHVHNFELASDKLDSTNRLRYIIVSQILELGIVLHSVILGISLGVSRSAKTIKPLVAVLTIHQCFEGIGLGGCISQAQFKYSKVAIMVLFFCLIFPIGIGIGIGISDIYNANSPKALIIEGFLLSASAGVLINMALVDLIAADFLNSKMLRSFRLQLGASLALFVGLICMSILAIMENF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04539 349 PANTHER ZINC/IRON TRANSPORTER 43 340 - -
Vivi2g04539 349 NCBIfam ZIP zinc/iron transport family 29 345 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vivi2g04539 349 Pfam ZIP Zinc transporter 45 344 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04539 Vivi-Chr2 160672124 160673642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04539 4 345 Inorganic Solute Cotransporters AT3G12750 44.380 2.52e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04539 K14709 - qsu:111993283 388.267