Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04537 ATGCTTCTCCGCCTAGTGATGTTGATGGTGAAGAGTTGCATGATGCGAGTGACATATTCAACCTTCTACAACGGGAGTGCGTTTGGCTTGCAAAGGGCATCTGGAGTTATGACACATGCTGTTAGAGTGGGTTTTGAAGATATATTAAATCACACCCAAGCAATGGCTAGAAGCTTTGAGGAAGTACCATCTCAGACTCAGAGTCCAAATGAGTCAATTTTGCTGGCTCTTAGAGATTTTATATCTGAAAGGCATGGTGTACTGGAGGAAGGTTGGCGAGTGGAACTTAGACAATCAATGATCAGCCCTGACCTGTATGCAGTTTATTGTGCCCCTGATGGAAAGATATTTGATTCTGTGTATGAAGTAGCTAATTATCTGGGGCTACCGTCTGGCTACAATTCCATGGAATCTGAAATAAAGAATGAAATGTCTCTTTCTTTAGGTGGGCCTCACATATCCAGAAAACGAAAGTCTTCTAGAACTCTGACAGCCAATGGTTATGCAGAAAAGCAGGGAACCATGATCAATAGTAATTATAAGGATTGCTCTTCTGATGGTTTCATTATGGAATGTGCTAATGCTCAGGGGACTATCCCAAAAGCCTCTGAGATTGGAAGAAAAGAGAACAGTCACACCGACCCTGATCAATCCGCTGATGGACTTCCTCTGCAGTTTAAGGACTTCTATGTTCTTTCTTTGGGAAAAGTTGATGGGAGACCTTCATATTATGATGTTAACCTTACCTTTCCTGTGGGTTATAGATCTTCCTGGCATGACAAGATTACTGGCTCTCTTTTTACGTGCGAAGTTTTGGATGGTGGTGATTCTGGGCCTTTATTTAGGATTAAAAGGTGTTCATGTTCAAAGTTTCCTATTCCAGATGGGTCAACCATCCTTTCAATGCAAAGTCATTGTCAATTTGTAAGCGAAACCAATGAATGTCGGAGAGAGACTAATGATAGTATGGATTTCGACGGTGACGAGAGTATCCAAATGATCCTTTTAGAACCCTGTGCCCCAACAGAAAATGACATCTTAAGTTGTGTTGCCAGTTGCTCAAATGAAACATATGCATCAGAAGGATTAAGGCCAGTTGCTGGTTCGGTTCGAGATAATACTGAAAATTCATTTGATGATAATATGGATTTTGGTGATGAAATTGGTGATATTTTGGTTGAAGAGCAGTCCCCATTCTCAGCATGGAAACTTATTTCTCAAAAGTTAGTCAGTGCTTGCAAGGATATCTGCAAGGAGAAAGGAACTCTTAAATTATATTGTAAACATGTTGTAAGTGAAATGGGCTTACATAAATGGGATTTAAGGAATGGAAAAATTGATACCCACTTCCCTTCGTTGGATAAATTTTGTGGTTATCCTGGGTTTGTCGGCATTCCAGATACACTTTATGCAGACAGTGATCTGACTGGTCTCTATGAGCTGTTAGGAAAATGGTTGGAGCAGGATAGATTTGGGTTAGATGTTGAATTTGTGCAAGAAGTATTGGAACAGCTTCCTGGCGTGCAGGATTCTTTGCAATATGAACTTTTGAGTAGTAGAACTAATAGCTCTTCATTACCAACAGTGGAGAATGGTTTCCTAGTGGTTGAATCTAAAGGTCAATCAAAATATCAAGATGAAGCAGCAGCTGTTCAAGGTTTATATAGAAGGCCTAAGAAGGCAAGATTGACTGAAAGTTTTGTTAAGGAAGATCAATGTCCACCTCCCGGGAAACCACTGTGCTCTAGGGCTCCTACTGAACTCATTGGTGACATTTTTGAGGTTTGGGAGCATTTAGATAGATTTCATGAAATTCTAGACCTTAAAGAACCATTGTTATTGGAGGAGCTTGAGAAGGAACTTATCAACCCATGGTTTGATGAATTAGAGTTCCCTGAGAAGTTGGAGAGGGGAATGGGTAGAAATCAAGTTTTATGTTCACAAGGGGGTAATGATGATTACCGACTAGTATGTGAAGCTGGTCCATCAGGTTCCACAGAAAGTTCTTTTATTCAAGTGGAAACAGAAGCTATGAAAGAGGAAGCCCAAGTTAAGCTCGCATCCTTCACCTATGTCAGATGCTTTGGTATAGCATTGACCAAGGCTCATAATTCATTACTAAGAGTGCTAATAGGTGAACTGCAATCAAAGGTGGCTGCTCTGGTGGATCCAAATTCTGAACCCGGAGAGACTCGGGGTAGACGAGGAAGAAGGAAAGATATAGATAGTGCAGTTCCTGCCAAACGAACTAAAGTCAATATGCTTCCTATTAATGAATTGACATGGCCAGAACTAGCTCGTAGATATATCTTAGCTTTCTTATCAATGGATGGTAACCTCGAGTCTGCGGAAATTACTGCCCGTGAAAGTGGTAAAGTATTTCGTTGCTTACGAGGTGATGGTGGTTTGCTGTGTGGGTCCCTTACTGGTGTGGCTGGGATGGAAGCTGATGCACTGTTGCTTGCGGAGGCAACATCGAAGATTTTTGGCTCCTTGAGCAGAGAAAATGATGTACTCATCATGGAAGAAGACGAGTCTGATGCAAAGGATGTTTCTGAAATGAAATTGGCAAATGATGGTAAAATTCCTGAATGGGCACAGGTGCTGGAACCTGTCAGAAAGCTACCAACAAATGTGGGAACCCGAATCAGAAAGTGTGTTAATGATGCTTTAGATAAGAATCCGCCAGATTGGGCGAGGGCAATACTGGAACACTCAATTAGTAAGGCCGTGTACAAGGGCAATGCATCTGGACCAACAAAGAAAGCAGTTCTTTCAGTGTTGAATGATGTAACTCAAGGAGTGCAGCCGAATACCAACAAGGAAAGGAAAAAGAAGATTATTATATCTATTTCTGACATTATTTTGAAGCAATGCCGCATTGTATTACGCCGTGCAGCTGCTGCAGATGATTCAAAAGTTTTTTGCAATTTGTTGGGAAGAAAATTAGTAAATTCTTCTGATAACGATGATGAGGGGCTTCTTGGATCTCCAGCTATGGTGGCCCGTCCTCTTGATTTCCGAACTATTGATCTAAGATTGGCTTCTGGAGCTTATGGTGGATCTCATGAAGCTTTTCTTGAGGATGTTCGCGAGCTGTGGAGCAATGTTCGTGTTGCTTTTGGGGATCAACCGGATTTAGTTGAACTTGCGGAAAAATTATCCCAGAATTTTGAACTTTTATACGATGATGAGGTTGTCACCTATGTCCAAAAGTTTGCAGAGTATGCTAAAGTGGGATGCTTAAGTGCAGAAATGAAAAAAGAAGTTGATGTTTTCATTGCATCAACAAGTGAGATTCCGAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCGTTGATAGGGACGATGACAGTGTTCTTCTATGTGATACTTGTGATGCTGAGTATCATAAATATTGCTTGAATCCTCCACTTGCAAGGATCCCCGAAGGAAATTGGTACTGTCCATCTTGTATTGGTGGTAAACATGCAACACAAGATGTCACGGAACCTGCTAAGATTACTGGAAAACGTAGTAGTAAAAAATTCCAGGGAGAAGTTATCTGTCTTTATTTGGAAGCACTAACTCATTTATCGGCTGTTATGGAAGAAAAAGAATATTGGGAGTACAGTGTGGGAGAGAGAATGCTCCTCCTCAAGTTTTTATGTGGCGAGTTGCTCAGCTCTTCTCTGATACGACAGCATCTTGAGCAATGTGCAGAGTCTTCTGTTGAGTTACATCAGAAATTGCGTGCACTTTCTGTGGAGTGGAAAAACCTGAAAATTAAGGAAGATGTTTTATCCACAAAAGCTGCAAAATTTGATTTGTTGTCACAAAGTACCAATGGAGAAGTTGGTCTTAAGGACGGATTCACATCTTTGTTCTCAAATACTAGTAAATGTCTTTTTAAGCCACATAGTGCAACCACCAATCCTAATGGTCCTGGGGTATTTGTTGATAGTCTACCTTCAGAAGAGATTCCTAAAGAGAAGTCTAGGTTCAATAGTGTTGATAAAAGCATATCCGTGACACATTCAGATTCTGATAGCCAAAACATGAATTCCATAGAAGGACAACTTAGGACTGTTCCTGTGGTTGTAGAGTCTCCATGTACAGATAAATCCCCCAAGTATTTTCCATCCCCAAATCATATGGCTCAAGGAATAAATGGTTACAGTGGAGCAACTCATATTCAGGGTAGCCACCAGAAATGTGAGGTAAGGGATGTATTTACTTCTGCTTCCTGCCAGCAGGGACAATGTGTGCCTGTTGAAGTTTCCCAGAATGCCGTGAATGAGTTGGAGCCATACCACCTCGAGCTCAATGCCGTCAAGCATAATATTTTGCTACTGCAGGACTCTATAACTAGCATAGGATCACAGCTGTCAAAGGTCCCTGTTCGTCGGGAATTTTTAGGAATTGATTCCATTGGTCGACTATACTGGGCTTTGGGTACGCCTAGTGAACGTTCACGTATAGTTGTTGATGCAAGTGCTGTTCTTCAGCATAGAAAAGGATTGTCAGTTGGCAAAAATTTTGTCGACAAGTTTTCCGCTCTGCAGCATTGGGCACTATCTGAGAAGGATAACTATAAGATGTTAGGGCTGATCAAGGACTGCTCTCCTTTGAATTCGCAACCACTTAAAGCTTCAGGCAATTGTTCACCGTGGATTGCTTATGAAACTGATTCAGAAATCGAAGAGCTGTTGGGTTGGTTAACAGATAATGACCCTAGAGAAAAAGAGTTGAAAGATTCCATTATGCTGGCGCAAAAACATAAGCTTCAAGAGTTTATTAATGCAAACACTGAATGTCAGGTTGATGACCAAGTGCCAAGAAATACACCATCTAATTCTCTTGTTACAAAGGCCACTTCCTTGCTGGAAAAGAACAGAACTACTGATGAAAAGTTGTGTAGGTGTGAATGCCTAGAGCCCATATGGCCTTCTAGGAAACATTGCTTGTATTGCCACAAAACCTTTTTGACTGATGATGAATTTGAGCTACACAATGATGGCAAATGTAATGCAGGACTTCTGGCCTTGGAGAAGAATAAAGATAAAAATGGATCTTCTAAAGGAAGAGGGAATTTGAAATGTGATGCCTCACATGAAAAGTCCCGAGCTTATGCAGAAACAGCTGGAACCTCAATCAATAAATGTTCCAAGCTAAGTTTGAATTTGATTAAATTTTCAAATGAAGGTTCCTCTTGCCCATTTAATTTTGAAGATATATGCTCAAAGTTTGTGACAGATGATTCCAACAAGAAGCTTGTCAGAGAAATTGGTCTTATTGGTTCAGATGGTGTCCCATCTTTTGTTTCTTCCATATCTCCTCTTGTTAGTGATTTTACGCTATTCTTATCCCTAAAGGGCGATGACATTGTTGGTGGTGCCTCTAAAGCTTTAGAAAGCCGGGTTTCTCAAGAAAACACTGATGGTGCTGGCATATGCCATGACAATAAATCAGGAAAATCCACTCAGAGTTTAGCTGCAAATGAAAGCAATGAAACAGGAAAATCGAGTAAATTAGGAGAACAAAGAGATGGAAAGTTCTCTTTTTGTAATCGGGCTTCCGATATGGGAGTCTATAGCTGCTGTGTGGTTCCTTCGTCGTCCTTGAGACCACTAGTTGGTAAAGTTTCTCATATCTTGAGGCAACTAAAGATTAATCTACTTGATATGGATGCTGCGCTTCCAGAAGTTGCTCTAAGACCATCAAAGGCACAGTTGGACAGAAGACAGGCTTGGCGTGCATTTGTTAAATCTGCAGAGACTATATATGCGATGATTCAGGCAACAATTGCACTGGAGGATATGATTAAGACGGAGTTCTTAAGGATTGACTGGTGGTACTGGTCAGCATTCTCAGCTGCTGCCAAATCTTCTACTTTGCCTTCCCTCGCTCTTCGGATATACTCTCTTGATTCAGCCATTATGTATGAGAAAATGCCCAATTCAAGTTTAACTGACAGCTCTGATCCTCCTGCCATAGCAGAACAGAAACTGGTGATCACCGTGGATGCAGATAAAACCAAGTCAAGCCGGAAGTCCAACAGGAAAAGAAAGGAATCGGATGGTTAA 6072 0.4117 MLLRLVMLMVKSCMMRVTYSTFYNGSAFGLQRASGVMTHAVRVGFEDILNHTQAMARSFEEVPSQTQSPNESILLALRDFISERHGVLEEGWRVELRQSMISPDLYAVYCAPDGKIFDSVYEVANYLGLPSGYNSMESEIKNEMSLSLGGPHISRKRKSSRTLTANGYAEKQGTMINSNYKDCSSDGFIMECANAQGTIPKASEIGRKENSHTDPDQSADGLPLQFKDFYVLSLGKVDGRPSYYDVNLTFPVGYRSSWHDKITGSLFTCEVLDGGDSGPLFRIKRCSCSKFPIPDGSTILSMQSHCQFVSETNECRRETNDSMDFDGDESIQMILLEPCAPTENDILSCVASCSNETYASEGLRPVAGSVRDNTENSFDDNMDFGDEIGDILVEEQSPFSAWKLISQKLVSACKDICKEKGTLKLYCKHVVSEMGLHKWDLRNGKIDTHFPSLDKFCGYPGFVGIPDTLYADSDLTGLYELLGKWLEQDRFGLDVEFVQEVLEQLPGVQDSLQYELLSSRTNSSSLPTVENGFLVVESKGQSKYQDEAAAVQGLYRRPKKARLTESFVKEDQCPPPGKPLCSRAPTELIGDIFEVWEHLDRFHEILDLKEPLLLEELEKELINPWFDELEFPEKLERGMGRNQVLCSQGGNDDYRLVCEAGPSGSTESSFIQVETEAMKEEAQVKLASFTYVRCFGIALTKAHNSLLRVLIGELQSKVAALVDPNSEPGETRGRRGRRKDIDSAVPAKRTKVNMLPINELTWPELARRYILAFLSMDGNLESAEITARESGKVFRCLRGDGGLLCGSLTGVAGMEADALLLAEATSKIFGSLSRENDVLIMEEDESDAKDVSEMKLANDGKIPEWAQVLEPVRKLPTNVGTRIRKCVNDALDKNPPDWARAILEHSISKAVYKGNASGPTKKAVLSVLNDVTQGVQPNTNKERKKKIIISISDIILKQCRIVLRRAAAADDSKVFCNLLGRKLVNSSDNDDEGLLGSPAMVARPLDFRTIDLRLASGAYGGSHEAFLEDVRELWSNVRVAFGDQPDLVELAEKLSQNFELLYDDEVVTYVQKFAEYAKVGCLSAEMKKEVDVFIASTSEIPKAPWDEGVCKVCGVDRDDDSVLLCDTCDAEYHKYCLNPPLARIPEGNWYCPSCIGGKHATQDVTEPAKITGKRSSKKFQGEVICLYLEALTHLSAVMEEKEYWEYSVGERMLLLKFLCGELLSSSLIRQHLEQCAESSVELHQKLRALSVEWKNLKIKEDVLSTKAAKFDLLSQSTNGEVGLKDGFTSLFSNTSKCLFKPHSATTNPNGPGVFVDSLPSEEIPKEKSRFNSVDKSISVTHSDSDSQNMNSIEGQLRTVPVVVESPCTDKSPKYFPSPNHMAQGINGYSGATHIQGSHQKCEVRDVFTSASCQQGQCVPVEVSQNAVNELEPYHLELNAVKHNILLLQDSITSIGSQLSKVPVRREFLGIDSIGRLYWALGTPSERSRIVVDASAVLQHRKGLSVGKNFVDKFSALQHWALSEKDNYKMLGLIKDCSPLNSQPLKASGNCSPWIAYETDSEIEELLGWLTDNDPREKELKDSIMLAQKHKLQEFINANTECQVDDQVPRNTPSNSLVTKATSLLEKNRTTDEKLCRCECLEPIWPSRKHCLYCHKTFLTDDEFELHNDGKCNAGLLALEKNKDKNGSSKGRGNLKCDASHEKSRAYAETAGTSINKCSKLSLNLIKFSNEGSSCPFNFEDICSKFVTDDSNKKLVREIGLIGSDGVPSFVSSISPLVSDFTLFLSLKGDDIVGGASKALESRVSQENTDGAGICHDNKSGKSTQSLAANESNETGKSSKLGEQRDGKFSFCNRASDMGVYSCCVVPSSSLRPLVGKVSHILRQLKINLLDMDAALPEVALRPSKAQLDRRQAWRAFVKSAETIYAMIQATIALEDMIKTEFLRIDWWYWSAFSAAAKSSTLPSLALRIYSLDSAIMYEKMPNSSLTDSSDPPAIAEQKLVITVDADKTKSSRKSNRKRKESDG 2023
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04537 2023 PANTHER OS02G0192300 PROTEIN 22 2019 - -
Vivi2g04537 2023 ProSitePatterns Zinc finger PHD-type signature. 1110 1154 IPR019786 -
Vivi2g04537 2023 ProSiteProfiles Zinc finger PHD-type profile. 1107 1157 IPR019787 -
Vivi2g04537 2023 MobiDBLite consensus disorder prediction 1808 1842 - -
Vivi2g04537 2023 SUPERFAMILY FYVE/PHD zinc finger 1094 1159 IPR011011 -
Vivi2g04537 2023 CDD Bromodomain 958 1059 - -
Vivi2g04537 2023 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1065 1168 IPR013083 -
Vivi2g04537 2023 ProSiteProfiles Bromodomain profile. 1000 1048 IPR001487 GO:0005515
Vivi2g04537 2023 MobiDBLite consensus disorder prediction 1326 1349 - -
Vivi2g04537 2023 SUPERFAMILY Bromodomain 945 1063 IPR036427 GO:0005515
Vivi2g04537 2023 ProSiteProfiles FYR domain FYRN motif profile. 221 274 IPR003888 GO:0005634
Vivi2g04537 2023 Pfam PHD-finger 1109 1155 IPR019787 -
Vivi2g04537 2023 Gene3D - 936 1064 IPR036427 GO:0005515
Vivi2g04537 2023 Pfam Bromodomain 998 1053 IPR001487 GO:0005515
Vivi2g04537 2023 MobiDBLite consensus disorder prediction 1808 1836 - -
Vivi2g04537 2023 MobiDBLite consensus disorder prediction 723 742 - -
Vivi2g04537 2023 SMART PHD_3 1109 1155 IPR001965 -
Vivi2g04537 2023 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1189 1233 IPR028942 -
Vivi2g04537 2023 CDD PHD1_Lid2p_like 1109 1154 - -
Vivi2g04537 2023 MobiDBLite consensus disorder prediction 1333 1349 - -
Vivi2g04537 2023 Pfam Methyl-CpG binding domain 79 130 IPR001739 GO:0003677
Vivi2g04537 2023 MobiDBLite consensus disorder prediction 728 742 - -
Vivi2g04537 2023 Gene3D - 222 331 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi2g04537 Vivi-Chr2 160577162 160590209 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04537 4 2023 C2H2 Transcription Factor Family AT3G01460 44.834 0.0 1564
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Vivi2g04537 Bromodomain 1.4e-05 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04537 K22768 - gmx:100820223 2791.14