Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04504 ATGAATTCTAGGAGATTAATTCATTTACTTTGGTGTTTCAATCTGTATGTAGCATTTACATTCATTCAAGTTTCATCTCAGAACAATGTCTATGATTCAACGAAATGCGTGTACCCTGCAATTTACAATTTTGGTGACTCAAATTCTGATACTGGAGCTGGATATGCATTATTCACTGGTGTAAAGCCTCCTAATGGCATAAGCTTTTTCGGAAGCCTCTCAGGAAGAGCTTCCGATGGTCGTCTCATCATCGATTTTATCAGTGAGGAGTTGAAGCTACCATATCTAAGTGCATATTTGAATTCAGTTGGATCAAATTACAGACATGGTGCAAACTTTGCAGTAGGAGGCGCGTCCATTCGTCCCGGCGGTTACAGTCCAATCAACCTTGGTATTCAAGTATCTCAGTTTGTTTTGTTCAAATCACACTCCAATATTCTCTTCAATCAACTCTCTAACAACAGGACAGAACCGCCTTTTAGAAGCGGTCTTCCGAGGAATGAGGATTTCTCTAAGGCCCTTTACACCTTTGATATTGGACAAAATGATATTGCCATTGGTTTGCAGCACACTTCTGAGGAACAGGTTAAAACCTCAATTCCTGATATCTTGAGTCAGTTCGCCCAAGCAGTGCAGGTTCTATACAATGAAGGTGCAAGGGTGTTTTGGATTCACAATACAGGTCCGATCGGATGCTTGCCCTATGACATAATCTATTATCAACACAAGAACGGTAACTTGGATGGAAACGGCTGTGTTAAACCGCACAATGAGATTGCTCAAGAATATAACAGGAAGCTAAAAGACCAAGTGTTTCAGCTAAGGAGAAAGTTTCCATTAGCCAAATTTACATATGTTGATGTTTACGCAGCCAAATATAAACTTATCAGCGATGCAAAGAGCCTAGGTTTTGTGAATCCATTGGAATTTTGCTGTGGAAGTTACTACGGTTACCATATAAATTGCGGGAAGAAGGCGATAATAAACGGAACAGTTTATGGAAATCCATGTAATAATCCTTCACAACATGTTAGTTGGGATGGTATACATTACTCCCAAGCAGCAAATCAATGGATTGCTAAACAAATTTTGTATGGATATTTATCTGATCCACCAGTTTCAGTTGTGAAGGCATGTCATACATGA 1146 0.3944 MNSRRLIHLLWCFNLYVAFTFIQVSSQNNVYDSTKCVYPAIYNFGDSNSDTGAGYALFTGVKPPNGISFFGSLSGRASDGRLIIDFISEELKLPYLSAYLNSVGSNYRHGANFAVGGASIRPGGYSPINLGIQVSQFVLFKSHSNILFNQLSNNRTEPPFRSGLPRNEDFSKALYTFDIGQNDIAIGLQHTSEEQVKTSIPDILSQFAQAVQVLYNEGARVFWIHNTGPIGCLPYDIIYYQHKNGNLDGNGCVKPHNEIAQEYNRKLKDQVFQLRRKFPLAKFTYVDVYAAKYKLISDAKSLGFVNPLEFCCGSYYGYHINCGKKAIINGTVYGNPCNNPSQHVSWDGIHYSQAANQWIAKQILYGYLSDPPVSVVKACHT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04504 381 CDD SGNH_plant_lipase_like 39 367 IPR035669 -
Vivi2g04504 381 SUPERFAMILY SGNH hydrolase 112 364 - -
Vivi2g04504 381 Pfam GDSL-like Lipase/Acylhydrolase 41 363 IPR001087 GO:0016788
Vivi2g04504 381 Gene3D SGNH hydrolase 27 366 IPR036514 -
Vivi2g04504 381 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 6 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04504 Vivi-Chr2 160094496 160096468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04504 32 364 Pollen Coat Proteome AT1G75910 30.000 6.87e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04504 - - gmx:100782272 630.557