Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04438 ATGTCTTCTTATTTTCTCTCTTCAAACCCAAAAATGCATACTTTCTCTATCTTACCTTCTCATTCAACCCTACAAATTTCAAACCACATAACCATATCCAAGTTTCACCCTCTTCAATTCCCTCATTCTCACCATTTCTCTTCTTCACCACTTAGGCTCACCATTGATGGATTTTCATGCCCATCTTCTTCTTTCTTTCAAACTCTTAGAAAGTCTTCACCTTTTCTCATTTCCACTCCAAAAATTCATTCTTTTAGAATCCTTGCTGCTTCTCTTCCAGAGAGACAAAGTCATGAACCAACTCAACCTTCTGGTGTTGTTCAGTCTTTACAACTTGGTTTCATGTTTGCTACTTGGTATCTCTTGAATATTTACTTCAACATTTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTGGGCTTTGCTTCACTGGTGATTAATTTGATCTGGATTTTGAATCTTCATCCAAGACCAAACATTAGAAGATCACAGTTTGCAGCAATTCTTCCACTGGTTGTGGCTCATACATTCGGAAACCTGTTGACCAACATTAGTCTTGGCAAGGTTTCTGTTTCATTCACTCACACCATCAAAGCTATGGAGCCTTTCTTCACTGTTGTTCTTTCATCTCTTCTCCTTGGTGAGGTGCCGACTTTTTGGGTGGTTTCTTCTCTTCTACCAATAGTTGGTGGAGTGGCATTGGCTTCAATGACTGAAGTCTCTTTCAATTGGATTGGATTCAGCACTGCAATGGCATCCAACCTTACGAATCAATCGCGGAACGTTATGAGCAAAAAACTAATGGCTAATGAAGAGGAAGCTTTGGACAATATCAATCTCTATTCAGTTATAACCATCATTTCCTTTTTCTTTTTGGTGCCATGTGCTATATTTTTGGAAGGTTTCAAGTTTACTCCTTCATACCTGAAATACGCGGCAAGCCAAGGATTGAATGTTAGAGAGTTATGCATAAGATCAGTTTTGGCTGCATTCTGCTTCCATGCATACCAGCAAGTTTCATATGGGATATTAGAAAAAGTGTCCCCTGTGACACATTCAGTTGGAAATTGTGTGAAGCGTGTGGTTGTCATAGTCTCTTCTGTTATCTTCTTCCAAACTCCTGTCTCACCTATTAATGCACTAGGAACTGCTATTGCACTTGTTGGTGTTTTCTTGTATTCAAGGGCAAAGAGGATTAAGCCTAAAACAAAAACAGCATAA 1248 0.3878 MSSYFLSSNPKMHTFSILPSHSTLQISNHITISKFHPLQFPHSHHFSSSPLRLTIDGFSCPSSSFFQTLRKSSPFLISTPKIHSFRILAASLPERQSHEPTQPSGVVQSLQLGFMFATWYLLNIYFNIYNKQVLKVYPFPATVTAFQLGFASLVINLIWILNLHPRPNIRRSQFAAILPLVVAHTFGNLLTNISLGKVSVSFTHTIKAMEPFFTVVLSSLLLGEVPTFWVVSSLLPIVGGVALASMTEVSFNWIGFSTAMASNLTNQSRNVMSKKLMANEEEALDNINLYSVITIISFFFLVPCAIFLEGFKFTPSYLKYAASQGLNVRELCIRSVLAAFCFHAYQQVSYGILEKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALVGVFLYSRAKRIKPKTKTA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04438 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 153 247 - -
Vivi2g04438 415 PANTHER SOLUTE CARRIER FAMILY 35 111 407 - -
Vivi2g04438 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 327 407 - -
Vivi2g04438 415 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 110 413 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vivi2g04438 415 Pfam Triose-phosphate Transporter family 110 403 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04438 Vivi-Chr2 158874876 158878630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04438 81 411 Antiporters AT3G01550 64.955 9.91e-147 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04438 K15283 - gmx:100819280 576.63