Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04403 ATGGAGAAAGAGATTGTGGAGAACCTTTGGAATGGTGATAGTGAAGCTCAAGTTCAAGCAGCAATGAAGCTTAGTAGATTGTGTAGTAAGCAAAAGCACAATTTGGTAGAAAGTGGAGTTATGGTCCCTTTGGTTTCCATGCTTCATTCTGAAAACTTTGAAGCTGTAGAAGCTTCTCTTTCTGCTCTTCTAAACCTTTCCTTTGGCAGTGAAAGAAACAAGATTCGGATTGTCCGGTATGGAGTTTTGCCAATTTTGCTGAACCTCCTCCATTGTGAAAGCCAGACAGTGATACAACTGTCATTAGCTGCCATGTTAACACTTTCTTCATGCAAGAGAAATAAGATAGCTATAGCTTCATCAGGTGCAGTTCAGATTTTGGTTGGATTTATCAATAGTAGTAACACTCACACTCAGTCTCAACTAGATGCCATAGCTACTCTCCATAACCTCACAACCTGCCAAGAGATTATCCCATTGATGGTATCTTCTGGTGTAATACTCTCCTTGCTTGAACTGATCCACGGCTCGGTAAAATCGTCTTCATCGGTTGAGAAAGCAATAGGGTTGCTAGAAAAGATTGTTTCTTCATCAGAGAGCGCACTTTGTGAGACTGCTAGTACTGGAGGAGCGATTCGGATACTGGTTGAGACTATTGAAGATGGATCATCACTGGGAAAAGAGCATGCAGTTGGTATACTTCTCCTTATATGTCAAAGTAGCAGAGAAAAATATAGAGTATTGATTTTGACAGACGGGGTGATGCCGGGATTGCTTCAGTTAAGTGCCGCTGGCACGAGCAGAGCCAAATCCATGGCTAGAGAATTGCTTTTGCTTCTGAGAGACTGCTCGAGTTGTAGCTCGAGACATAGACAAATTAATCATGAACTTATAGAACAGATAATGGACGAGATTGATGCAGAAGGAGAGAAATTGGGACATACTACTTTGAGATTGGTAGAGGAGATGATTGCAAAGCTCAATACATAA 990 0.4141 MEKEIVENLWNGDSEAQVQAAMKLSRLCSKQKHNLVESGVMVPLVSMLHSENFEAVEASLSALLNLSFGSERNKIRIVRYGVLPILLNLLHCESQTVIQLSLAAMLTLSSCKRNKIAIASSGAVQILVGFINSSNTHTQSQLDAIATLHNLTTCQEIIPLMVSSGVILSLLELIHGSVKSSSSVEKAIGLLEKIVSSSESALCETASTGGAIRILVETIEDGSSLGKEHAVGILLLICQSSREKYRVLILTDGVMPGLLQLSAAGTSRAKSMARELLLLLRDCSSCSSRHRQINHELIEQIMDEIDAEGEKLGHTTLRLVEEMIAKLNT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04403 329 Gene3D - 205 308 IPR011989 -
Vivi2g04403 329 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 39 81 IPR000225 GO:0005515
Vivi2g04403 329 PANTHER U BOX DOMAIN-CONTAINING 4 285 - -
Vivi2g04403 329 Gene3D - 3 204 IPR011989 -
Vivi2g04403 329 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Vivi2g04403 329 FunFam U-box domain-containing protein 4 202 318 - -
Vivi2g04403 329 SMART arm_5 111 153 IPR000225 GO:0005515
Vivi2g04403 329 SMART arm_5 28 68 IPR000225 GO:0005515
Vivi2g04403 329 SMART arm_5 154 196 IPR000225 GO:0005515
Vivi2g04403 329 SMART arm_5 70 110 IPR000225 GO:0005515
Vivi2g04403 329 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 166 IPR000225 GO:0005515
Vivi2g04403 329 FunFam U-box domain-containing protein 4 3 198 - -
Vivi2g04403 329 Pfam Kinesin-associated protein (KAP) 23 170 - -
Vivi2g04403 329 SUPERFAMILY ARM repeat 4 311 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04403 3 282 U-box Gene Family AT2G23140 32.639 1.88e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04403 - - gmx:100778534 463.381