Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04400 ATGTTGGGTTCTACAGCAATACTTTGTGCACTCTTTTTCTTCCTTTTCATCATCTTCAAAATCCACCGCCATAGACAAAAATGTTGCAAATACCCCATCTTTAGAGATTATCCTTTTCTAGGCATGCTACCAACAATCCTTTGGAACTTATGGAATATTCATGATTTCATAACCGAGGAGTTGAAAAAGCACCATAGAGGCACTGCTGAATTCATGGGACCATGGTTCACCAACATGAACTATTTGATCACAAGTGATCCCATCAACGTTCATCACATGATGAGCAAGTGTTTTGACAACTATGTGAAGGGCTCTGAGTTTCGTGATATTTTTGAAGCCTTTGGAGATGGAATATTTGTCGCAGATTCAGAAACATGGAAATATAACAGGTCTCTTTTTCACTCAGTTTTCAAACAAAGAGGCTTTGAGCTTTTTCAAGAGAAAATCATTCAAAACAAGCTGGAAAGAAGCTTGATTCCGTTGTTGGATCATGTACAAGAACAAGAGTCGGTGGTGGATTTACAAGATGTATTCAGTCGTTTCACATTCGACAACATTTGTTCTGTTGTTCTTGGATGTGATCCTAACTGTCTTTCCATTGAATTTCCTGATGTTGCTTGTGAGAAAGCTTTTGACCAAATTGAAGAATGCATATTCTATAGGCATGCTATTCCAAAAAGTTTTTGGATGTTTCAAAAATTTCTTCAAGTTGGTCAAGAGAAAAAGATGACAAAAGCATATAAAGAATTTGATCAATTTATATATGCTAATATAGAGTCCAAAAGAGAGGAGCTAAAAAGAGGTACAAAAAATATTGAAATGGTTGACTTGTTAACAACTTTCATGAAAGTGGAGAAGGGGTCACAAGTGGTAGTACATGATGATAAGTTTCTAAGAGATGTTGCTTTCAATCTCTTTGTAGCAGGGAGAGATACAATAACTTCAGCACTAACATGGCTCTTTTATCTTATTGCTACACATCCTTTAGTAGAAGCCAAAATTCTTCAAGAGATTAAAGAAAATTTTGGGACTATTAGTATTGAAAAGAAGTTAGGAGTTGATGAGGTGAAAAAACTAGTTTATCTTCATGGTGCTATATGTGAGGCTGTGAGACTTTTTCCTCCTATACCTTTTGAGAGAAAGCAAGCAATCAAAGATGATATACTTCCAAGTGGTCACTTTGTTAGTTCCAATACAACTATACTATTTTCTTTGTATTCAATGGGGAGAGTTGAAGAGACATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATATCTGAGAGAGGGGGCATTGTTCATGAACCATCTTACAAGTTCATTAGTTTTAATGCTGGACCTAGGACTTGTTTGGGAAAAGACTCTTCCTTCATTCAAATTAAGATGGTAGCTGTTGCTATTTTGAGAAACTATCATATTCAAGTAGTAAATGGTCATATTCCTATCCCAAATCTTTCAATTGTACTTCTTATGAAGAATGGTTTGAAGGTTAGGATAAGAAAAAGGGAAAATTGA 1521 0.357 MLGSTAILCALFFFLFIIFKIHRHRQKCCKYPIFRDYPFLGMLPTILWNLWNIHDFITEELKKHHRGTAEFMGPWFTNMNYLITSDPINVHHMMSKCFDNYVKGSEFRDIFEAFGDGIFVADSETWKYNRSLFHSVFKQRGFELFQEKIIQNKLERSLIPLLDHVQEQESVVDLQDVFSRFTFDNICSVVLGCDPNCLSIEFPDVACEKAFDQIEECIFYRHAIPKSFWMFQKFLQVGQEKKMTKAYKEFDQFIYANIESKREELKRGTKNIEMVDLLTTFMKVEKGSQVVVHDDKFLRDVAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILQEIKENFGTISIEKKLGVDEVKKLVYLHGAICEAVRLFPPIPFERKQAIKDDILPSGHFVSSNTTILFSLYSMGRVEETWGKDCLEFKPERWISERGGIVHEPSYKFISFNAGPRTCLGKDSSFIQIKMVAVAILRNYHIQVVNGHIPIPNLSIVLLMKNGLKVRIRKREN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04400 506 Pfam Cytochrome P450 44 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 PANTHER CYTOCHROME P450 21 499 - -
Vivi2g04400 506 CDD CYP86A 70 497 - -
Vivi2g04400 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vivi2g04400 506 Gene3D Cytochrome P450 18 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 SUPERFAMILY Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04400 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04400 Vivi-Chr2 158396606 158398313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04400 6 506 Cytochrome P450 AT2G23180 46.667 1.48e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04400 - - aprc:113867564 691.419