Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04399 ATGTTGAGTTCTACAACAATACTTTGTGCACTCTTTTTCTTCCTTTTCATCATCTTCAAAATCCACCGCCATAGACAAAAATGTTGCAAATACCCCATTTTAAAAGATTATCCTTTTTTAGGCATGTTACCAACACTCTTTTGTAACTTGTGGAATTTTCATGATTTCCTATCTGAGAAATTGAAAATGCACCATAGGGGCACTGCTGAGTTCATGGGACCATGGTTTACCAACATGAACTATTTGGTTACTAGTGATCCCATCAATGTTCATCACATGCTTAGCAAGTGTTTTGACAATTATGTCAAAGGTCACGAGTTTCGTGATATTTTTGAAGCTTTTGGAAATGGGATATTTATCTCAGATTCAGATACATGGAAATATAACAGGTCTCTTTTTCTCTCAGTTTTTAAACAAAGAGGCTTTCAACTTTTTCAAGAGAAAGTCATTCAAAACAAGTTGGAGACAAGTTTGATTCCTTTGTTGGACCATTTACAACAACAAGGGTCAGTGGTGGATTTGCAAGATGTATTCAACCGTTTCACATTCGACAACATTTGTTCTGTAATTCTTGGATGTGATCCTAATTGTCTTTCCATTGAATTCCCCGATGTTGCTTGTGAGAAGGCTTTTGAACAAATAGAAAAATGCATATTCTATAGGCATGTTATGCCAAGAAGTTTTTGGATGTTACAAAAACTACTTCAAGTTGGTGAAGAGAAAAAGATGACAAAAGCATGCAAAGAATTTGATCAATTTATATATGCTAATATAGAGTCCAAAAGAGAGGAGCTAAGAAAAGGTATAGTACAAAATGTTGAAATGGTTGATGTGTTAACAACTTTCATGAGTGCTGAAAAGAGTTCGCAAGTAATAGCACATGATGATAAGTTTCTTAGAGATGCTGCTTCCAATCTCTTTATAGCAGGAAGAGATACAATAACTTCAGCACTAACATGGCTCTTTTATCTTATTGCTACACATCCTTTAGTCGAAGCCAAAATTCTTCAAGAGATTAAAGAAAATTTTGGGACTATTAATATTGAAAACAAGTTAGGGGTTGATGACGTGAAAAAGCTAGTTTATCTTCATGCTGCTATATGTGAAACTGTAAGGCTTTTTCCTCCTGTACCCTTTGAGAGAAAGAAAGCAGTCAAAGATGATATACTTCCAAGTGGACACGTTGTTAATCGTAATGCCATCATACTATTTTCTTTGTATTCAATGGGGAGAGTTGAAGAGACATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATATCTGAGAGAGGGGGCATTGTTCATGAACCATCTTACAAGTTCATTAGTTTTAATGCTGGACCTAGGACTTGCTTAGGAAAAGACTTGGCATTCATTCAAATTAAGATGGTAGCAATTGCTATTTTGTGCAACTATCATATTCAAGTAGTAAAAGGTGATATTCCTACCCCAAATCTTTCCATTGTTCTTCTTATGAAAAATGGTTTGAAGGTTAGGATAAAAAAAAGAGAAATTTGA 1524 0.3504 MLSSTTILCALFFFLFIIFKIHRHRQKCCKYPILKDYPFLGMLPTLFCNLWNFHDFLSEKLKMHHRGTAEFMGPWFTNMNYLVTSDPINVHHMLSKCFDNYVKGHEFRDIFEAFGNGIFISDSDTWKYNRSLFLSVFKQRGFQLFQEKVIQNKLETSLIPLLDHLQQQGSVVDLQDVFNRFTFDNICSVILGCDPNCLSIEFPDVACEKAFEQIEKCIFYRHVMPRSFWMLQKLLQVGEEKKMTKACKEFDQFIYANIESKREELRKGIVQNVEMVDVLTTFMSAEKSSQVIAHDDKFLRDAASNLFIAGRDTITSALTWLFYLIATHPLVEAKILQEIKENFGTINIENKLGVDDVKKLVYLHAAICETVRLFPPVPFERKKAVKDDILPSGHVVNRNAIILFSLYSMGRVEETWGKDCLEFKPERWISERGGIVHEPSYKFISFNAGPRTCLGKDLAFIQIKMVAIAILCNYHIQVVKGDIPTPNLSIVLLMKNGLKVRIKKREI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04399 507 SUPERFAMILY Cytochrome P450 25 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PANTHER CYTOCHROME P450 21 500 - -
Vivi2g04399 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vivi2g04399 507 CDD CYP86A 70 498 - -
Vivi2g04399 507 Pfam Cytochrome P450 47 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04399 507 Gene3D Cytochrome P450 18 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04399 Vivi-Chr2 158366670 158368313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04399 10 505 Cytochrome P450 AT4G39490 45.029 3.84e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04399 - - aprc:113867564 675.626