Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04398 ATGTTTAGTTCTATAACAATATTTTGTACACTCTTTTTCTTCCTTTTCATCATCTTCAAAATCCATCATAGAAGAAAATGTTGCAAATACCCCATCTTTAGAGATTATCCTTTTCTAGGCATGTTACCAACAATCCTTTGGAACTTGTGGAATGTTCATGATTTCATAACTGAGGAATTGAAAAAACGCCATAGAGGCACGGCTGAGTTCATGGGACCATGGTTTACCAACATGAACTATTTAATTACTAGTGATCCCATCAACGTGCATCACATGCTTAGCAAGTGTTTCGACAATTATGTGAAAGGTCACGAGTTTCGTGATATTTTTGAAGCGTTTGGAAATGGAATATTTGTGGCAGATTCAGAGACATGGAAATACAATAGATCTCTTTTTCACTCTCTTTTCAAACAAAGAGGCTTTGAATTTTTCCAAGAGAAAATTATTCAAAATAAGTTAGAAAAAAGCTTGATTCCTTTGTTGGATCATGTTCAACAACAAAGTTCAGTGGTGGATTTACAAGATGTATTCAATCGCTTCACATTTGACAACATTTGTTTGATAGTTCTCGGATGTGATCCCAATTGTCTTTCCATTGAACTTCCTGATGTTGCTTGTGAGAAGGCTTTTGATCAAATTGAAGAATGCATATTCTATAGGCATGTTATGCCAAAAAGTCTTTGGATGTTACAAAAACTACTTCAAGTTGGTGAAGAGAAAAAGATGACAAAAGCATGCAAAGAATTTGATCAATTTATATATGCTAATATAGAGTCCAAGCGAAAGGAGTTAAAAAAGGGTGTGAAAAATATTGAAATGGAAGACTTGTTAACCATTTTGATGAGAGACGAGAAACGGTCGGAAGTAGTAGTTCATGATGACAAGTTTCTAAGGGATGCTGCTTTCAATCTCTTTGTAGCTGGAAGAGATACAATAACTTCAGCCCTTACATGGCTCTTTTATCTTATTGCTACACATCCTTTAGTAGAAGCCAAAATTCTTGAAGAGATTAAAGAAAATTTTGGGACTATTAGTATTGAAAACAAGTTAGGGGTTGATGATGTGAAAAAGCTAATTTATCTTCATGGTGCTATATGTGAGGCTGTAAGACTTTTTCCTCCTATACCCTTTGAGACAAAGCAAGCAATCAAAGGTGATATACTTCCAAGTGGCCATGTTGTTAATCCTAATACAACCATACTATTTTCTTTGTATTCAATGGGGAGAGTTGAAGAGACATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGGGGCATTGTTCATGAACCATCTTACAAGTTCATAAGTTTTAATGCTGGGCCTAGGACTTGTTTGGGAAAGGACTTGTCATTCATTCAAATTAAGATGGTAGCAGTTGCTATTTTGTGCAAATATCATGTCCAAGTAGTGAAAGGTCATATTCCTATCCCAAATCATTCAATAGTACTTCTTATGAAGAATGGTTTGAAGGTTAGGTTGACAAAAAGAGAAATTTGA 1518 0.3531 MFSSITIFCTLFFFLFIIFKIHHRRKCCKYPIFRDYPFLGMLPTILWNLWNVHDFITEELKKRHRGTAEFMGPWFTNMNYLITSDPINVHHMLSKCFDNYVKGHEFRDIFEAFGNGIFVADSETWKYNRSLFHSLFKQRGFEFFQEKIIQNKLEKSLIPLLDHVQQQSSVVDLQDVFNRFTFDNICLIVLGCDPNCLSIELPDVACEKAFDQIEECIFYRHVMPKSLWMLQKLLQVGEEKKMTKACKEFDQFIYANIESKRKELKKGVKNIEMEDLLTILMRDEKRSEVVVHDDKFLRDAAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGTISIENKLGVDDVKKLIYLHGAICEAVRLFPPIPFETKQAIKGDILPSGHVVNPNTTILFSLYSMGRVEETWGKDCLEFKPERWISERGGIVHEPSYKFISFNAGPRTCLGKDLSFIQIKMVAVAILCKYHVQVVKGHIPIPNHSIVLLMKNGLKVRLTKREI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04398 505 Coils Coil 254 274 - -
Vivi2g04398 505 PANTHER CYTOCHROME P450 18 498 - -
Vivi2g04398 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vivi2g04398 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 SUPERFAMILY Cytochrome P450 22 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 CDD CYP86A 69 496 - -
Vivi2g04398 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 Gene3D Cytochrome P450 17 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04398 505 Pfam Cytochrome P450 44 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04398 Vivi-Chr2 158348199 158349907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04398 4 503 Cytochrome P450 AT4G39490 46.887 2.30e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04398 - - aprc:113867564 692.189