Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04396 ATGATCAATATCATGTTTAGCTATACATCAATATTTTTTGCACTTTTTTTCTTCTTGTGCATAATCTTCCAAATTCATCGTAGACTAGTTTGCAAGTATCCAGTTTTTATAGATTATCCTTTTCTCGGCATGTTACCGCCAGTGCTTTGGAACTTGTGGAGAATTCATGATTTCATTACTGAGGAATTGAAACAACAACATAGGAGCACATGTGAGTTCATGGGACCTTGGTTTACCAACATGAACTATTTGATCACTAGTGATCCCATCAACGTGCATCACATGATGAGCAAGTGTTTTGATAACTATGTGAAGGGTGATGAGTATCATGAGATTTTTGAAGCATTTGGAGATGGAATATTTGCGAGCGATTCGGATACATGGAAATACAATAGGTCTCTTTTTCATTCAATTTTCAAGCAAAAAGGTTTTGAAGTGTTTCAAGAGAAAATTATTCGAAACAAGTTGGAGAGAAGCTTGATTCCTATGTTGGATCATGTTCAACAACAAGGGTTGGTGGTGGATTTACAAGATATATTCAACCGCTTCACATTCGATAATATTTGTTCAATAGTTCTTGGATGCGATCCAAATTGTCTATCCGTTGAACTTCCTGATGTTGCTTGCGAGAAGGCTTTTAACCAAATTGAAGAGTGCATATTCTATAGACATAAAGTGCCTAAAAGTATTTGGAAGTTGCAAAAATGGCTTCAAATTGGTGAAGAGAGAAATATGACCAATGCATGCAAAACCTTTGATCAATTTATATATGCAAATATAGAGTCCAAAAGAGAGGAGCTAAGAAAATGTAGCAAAGATATTGAAATGTTTGATTTGCTAACAACTTTGATGAAAGAGGAGAATGTGTCACGAGAAGTCGTACACGATGACAAGTTTATAAGAGATGCTGCTTTCAATCTATTTGTAGCGGGAAGAGATACTATAACTTCAGCTCTTACATGGCTATTTTATCTTATTGCTACACATCCTTTAGTAGAAACTAAGATTCTTGAAGAGATTAAAGAAAATTTTGGAACAATTAATATTGAAAAGAATTTAGGAGTGGATGAGGTTAAAAAGCTAGTTTATCTTCATGGTGCTATATGTGAGGCTCTAAGGCTCTTTCCTCCTGTACCTTTTGAGAGAAAGCAAGCAATTAAAGGTGATGTACTTCCAAGTGGTCACATTGTTGATCCTAATACAATGATATTGGTTTCTTTGTATTCAATGGGGAGATTTGAAGATGTATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGGGGCATTGTTCATGAACCATCTTACAAGTTCATAAGTTTTAATGCTGGGCCTAGGACTTGTTTGGGAAAAGACTCTTCCTTCATTCAAATTAAGATGATAGCAATTGCAATTTTATGCAACTATCGGGTACTATTGGAGGAAGGTCACATTCCTTCATTAAGTCATTCTATTGTACTTTTTATGAAGAATGGTTTGAAGGTTCGGATTGCAAAAAGATAA 1521 0.3544 MINIMFSYTSIFFALFFFLCIIFQIHRRLVCKYPVFIDYPFLGMLPPVLWNLWRIHDFITEELKQQHRSTCEFMGPWFTNMNYLITSDPINVHHMMSKCFDNYVKGDEYHEIFEAFGDGIFASDSDTWKYNRSLFHSIFKQKGFEVFQEKIIRNKLERSLIPMLDHVQQQGLVVDLQDIFNRFTFDNICSIVLGCDPNCLSVELPDVACEKAFNQIEECIFYRHKVPKSIWKLQKWLQIGEERNMTNACKTFDQFIYANIESKREELRKCSKDIEMFDLLTTLMKEENVSREVVHDDKFIRDAAFNLFVAGRDTITSALTWLFYLIATHPLVETKILEEIKENFGTINIEKNLGVDEVKKLVYLHGAICEALRLFPPVPFERKQAIKGDVLPSGHIVDPNTMILVSLYSMGRFEDVWGKDCLEFKPERWISERGGIVHEPSYKFISFNAGPRTCLGKDSSFIQIKMIAIAILCNYRVLLEEGHIPSLSHSIVLFMKNGLKVRIAKR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04396 506 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 CDD CYP86A 71 499 - -
Vivi2g04396 506 PANTHER CYTOCHROME P450 25 501 - -
Vivi2g04396 506 SUPERFAMILY Cytochrome P450 39 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 Gene3D Cytochrome P450 30 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vivi2g04396 506 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04396 506 Pfam Cytochrome P450 47 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04396 Vivi-Chr2 158250926 158252704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04396 7 506 Cytochrome P450 AT2G23180 44.510 2.04e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04396 - - aprc:113867564 696.812