Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04393 ATGATGATCATGCTAACACCATTTCTAGCTATGGCTATCACATTCATCCTCCCTCTATTTCTATATGCTTTTTACCAAACACTACACCTCAAAACTCCTGCATTCACAAATTGGCCTTTTATTGGTATGCTACCAAGATTCCTATGGAACGTTTCACGTATTCATGAATTTTCAGCTCATTTTTTGAATGCAAAAGGTGGCACAGTTGAGTTCATAGGACCTTGGTTTACCAATATGAATGGTGTAATCACAATTGATCCAATGAATGTCCACTACATTATGAGCAAGAGTTTCGACAACTTTGTGAAAGGCGATTTGTTTCGCGAAATGTTTCAAGCTTTTGGTTTAGGTATTTTCACCACTGATTCACATGAATGGAAATACAGTAGGAATCTTCTTCAATATCTTTTCAAACAAAGGAGCTTTGAAACTTATCAAGAGAAAGCCATTCACAACAAAGTTGAGAAATCATTGATTCCACTACTCAATCATGTTCAACAAAATGAATCGACGGTCGATTTACAAGATATTTTCAATCGTTTCACGTTTGATAATATTTGTTTGATAGTTCTTGGAAATGATCCCAATTGTCTTTCCTTAGATTTCCCTGAAGTTGCGGTTGAAAAGGCTTTTAACCAAGCTGAAGAATCCATCTTCTATAGACACACCGTACCAATGTGTGTTTGGAGGTTGCAAAGATGGCTTCAAATCGGCGAAGAGAAAAAAATGACCAAGGCATGCAAAGTATTTGACAAATTTTTATTTGAATGCATATCTTCTAAACGAAAAGAGCTTATAAAAAATGGTAACAAAAATGAAATTAATGTTGTGAGCGAGAAAAACCATCATGTTGATTTGCTAACCGCGATGATAGGAGAAGAAGAATCAAAGGATGATGAAAGTGGCGACAAGTTTCTAAGAGATGCTGCTTTCAATCTCTTTGTAGCGGGGAGAGATACTATAACTTCCGCACTTACATGGTTATTTTATCTTATTGCTACGCACCCTTTGGTGGAAGCAAAGATTCTTGAAGAGATAAAAGAACTTTTTGGTCACAAAGAGAAGCCTTGGATTTTAAGCGTCGATGAGACGAAAAAGCTTGTTTATCTCCATGGTGCTATATGTGAGGCATTAAGGCTTTTTCCACCAGTACCTTTTGAGAGAAAGGAAGCTGTTAAACCTGATATACTTCCAAGTGGTCATCATGTTTATCCAAATGCAATGATATTGTTTTCCTTATATGCAATGGGAAGGTATGAAGATATTTGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGGTGGATTTCAGACCGAGGAGGTATTGTTTATGTGCCTTCTTACAAGTTCTTTAGTTTTAATGCTGGGCCTAGGACTTGTTTGGGAAGAGACTTGGCTTTTATTCAAATTAAGATGGTGACTGCTTCTATTTTGTGGAACTATTGTGTCCATGTTGTGGAAGGTAATTGTATCACTCCTAACCTTTCAATTGTACTTCTCATGAAACATGGTCTCAAGGTTAAGATAACCAAAAGAGAAATTTAG 1545 0.367 MMIMLTPFLAMAITFILPLFLYAFYQTLHLKTPAFTNWPFIGMLPRFLWNVSRIHEFSAHFLNAKGGTVEFIGPWFTNMNGVITIDPMNVHYIMSKSFDNFVKGDLFREMFQAFGLGIFTTDSHEWKYSRNLLQYLFKQRSFETYQEKAIHNKVEKSLIPLLNHVQQNESTVDLQDIFNRFTFDNICLIVLGNDPNCLSLDFPEVAVEKAFNQAEESIFYRHTVPMCVWRLQRWLQIGEEKKMTKACKVFDKFLFECISSKRKELIKNGNKNEINVVSEKNHHVDLLTAMIGEEESKDDESGDKFLRDAAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKELFGHKEKPWILSVDETKKLVYLHGAICEALRLFPPVPFERKEAVKPDILPSGHHVYPNAMILFSLYAMGRYEDIWGKDCLEFKPERWISDRGGIVYVPSYKFFSFNAGPRTCLGRDLAFIQIKMVTASILWNYCVHVVEGNCITPNLSIVLLMKHGLKVKITKREI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04393 514 Gene3D Cytochrome P450 23 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 Pfam Cytochrome P450 36 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 SUPERFAMILY Cytochrome P450 33 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04393 514 CDD CYP86A 70 505 - -
Vivi2g04393 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vivi2g04393 514 PANTHER CYTOCHROME P450 27 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04393 Vivi-Chr2 158199854 158201514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04393 3 513 Cytochrome P450 AT2G23180 43.931 3.45e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04393 - - tpra:123904061 870.537