Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04390 ATGATCATCCTAACACCATTTCTAGCCATGGCTATCACATTCATTCTCACCCTATTTCTATATGCTTTTTACCAAACACTATATTTCAAAACACCTGCATTCACAAATTGGCCTTTTATTGGTATGCTACCAAGATTCCTATGGAATGTGTCACAAATTCATGAATTTTCAGCTCATTGGTTGGAATCAAAAGGTGGCACAGTTGAGTTCATAGGACCTTGGTTTACCAACATGAATGCTGTAATGACAGCTGATCCAATGAATGTTCACTACATTATGAGCAAGAGTTTCGACAACTTTGTGAAAGGCGATTTGTTTCGCGAAATGTTTCAAGCTTTTGGTGAAGGTATTTTCACTACCGATTCGATTCAATGGAAATACCATAGGAATCTTCTCCAATATCTTTTCAACAGAAGCTTTGAATCATTTCAAGAGAAAATCATTCACAACAAAGTTGAGAAATCTTTGATTCCACTATTGAATCATGTTGTTCAACAAAAAGAGTCGATAGTCGATTTACAAGATGTTTTCAACCGTTTTACGTTTGATAACATTTGTTTGATAATTCTTGGACAGGATGCTAACTGTCTTTCCATAGATTTTCCTGAAGTTGCGGTCGAGAAGGCTTTTAACCAAGCCGAAGAATCCATCTTCTATAGACACATTGTGCCGGAATGTGTCTGGAAGTTGCAAAAATGGCTTCAAATTGGCGAAGAGAAAAAAATGACCAAGGCATGCAAAATATTTGATAAATTTCTATACGATTGTATAGCTTCAAAGCGCGAAGAGCTTAAGAAAAAATGTAACAAAAATGCTGAGAGTGAGAAAAATCAACACGTTGATTTGCTAACCGCGTTGATTCGAGAAGAAGAAGGAGAAACAAAGGATAGTAAAAGTGGTGACAAGTTTCTAAGAGATTCTGCATTCAATCTCTTTGTAGCAGGGAGAGATACTCTAACTTCTGCACTAACATGGCTCTTTTATCTCGTTGCTACACATCCTTTAGTGGAAATGAATATTCTGAAAGAGATAAAAGAAAATTTTGGACACAAAGAGAAGCCTTGGGTTTTAAGTGTTGATGAGACGAAAAAGCTTGTTTATCTGCATGGTGCTATATGTGAGGCACTAAGGCTTTTTCCACCAATACCATTTGAGAGAAAGGAAGCTGTTAAACCTGATATACTTCCAAGTGGTCATCATGTTTATCCTAATAAAATGATATTGTTTTCTTTGTATGCAATGGGGAGGTTTGAAGATACATGGGGAAAAGATTGTAGGGAGTTTAAGCCAGAGAGGTGGATTTCTGAGAGAGGAGGTAATGTTTATGTCCCAGCTTACAAATTCTTTAGCTTTAATGCTGGGCCTAGGACTTGTTTGGGAAGAGACTTGGCTTTCATTCAGATTAAGATGGTGGCTGCTTCTGTTTTATGGAACTATTGTGTGCATGTTGTGGAAGGTAGTCGTGTAACTCCTAGTCTTTCAATTGTGCTTCTCACCAAAGAAGGTCTCAAGGTTAAGATAACCAAGAGGGTGCAGTGA 1539 0.3743 MIILTPFLAMAITFILTLFLYAFYQTLYFKTPAFTNWPFIGMLPRFLWNVSQIHEFSAHWLESKGGTVEFIGPWFTNMNAVMTADPMNVHYIMSKSFDNFVKGDLFREMFQAFGEGIFTTDSIQWKYHRNLLQYLFNRSFESFQEKIIHNKVEKSLIPLLNHVVQQKESIVDLQDVFNRFTFDNICLIILGQDANCLSIDFPEVAVEKAFNQAEESIFYRHIVPECVWKLQKWLQIGEEKKMTKACKIFDKFLYDCIASKREELKKKCNKNAESEKNQHVDLLTALIREEEGETKDSKSGDKFLRDSAFNLFVAGRDTLTSALTWLFYLVATHPLVEMNILKEIKENFGHKEKPWVLSVDETKKLVYLHGAICEALRLFPPIPFERKEAVKPDILPSGHHVYPNKMILFSLYAMGRFEDTWGKDCREFKPERWISERGGNVYVPAYKFFSFNAGPRTCLGRDLAFIQIKMVAASVLWNYCVHVVEGSRVTPSLSIVLLTKEGLKVKITKRVQ 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04390 512 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 CDD CYP86A 69 503 - -
Vivi2g04390 512 Gene3D Cytochrome P450 24 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 Pfam Cytochrome P450 34 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 Coils Coil 257 289 - -
Vivi2g04390 512 PANTHER CYTOCHROME P450 23 503 - -
Vivi2g04390 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vivi2g04390 512 SUPERFAMILY Cytochrome P450 32 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g04390 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04390 Vivi-Chr2 158124690 158126369 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04390 2 510 Cytochrome P450 AT2G23180 42.775 3.03e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04390 - - tpra:123904061 853.203