Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04378 ATGGCAATTTCTGCTTCCAAAATTGTCTTATCAATGTTGATAACTATTCTTGTTTTATTTCAACTTACAGATGGTCTAAGGGCTCCAGATAGAGTATACATTTCCATTACCAGCAACATAACTGATCTTCAGTTTGGTGTTCATTGTAAAGATAAAAAGCATGATATTGGGTTTCAATCATTGAAATTTGGAGAAAATTACGCATTTGATTTTCAGCCTAAGGCTTTTTTAAGAGCATTTTTATACTTTTGTCGATTTACATGGGCTAATGAATTTCATTACTTTGACATTTATAAGGAAACAAGAGATCAGGATATATGCAGCAAATGTAATTGGAAGATAAATAAATCAGGACCATGTAGAGAAACTGAAACATCTGATACATGTTCTCCTTGGAACCCTAATCATGTTATAGAAGGGAAACTACTAGTTGAAGAGAATAATACTCTTATGGTGTAA 459 0.3203 MAISASKIVLSMLITILVLFQLTDGLRAPDRVYISITSNITDLQFGVHCKDKKHDIGFQSLKFGENYAFDFQPKAFLRAFLYFCRFTWANEFHYFDIYKETRDQDICSKCNWKINKSGPCRETETSDTCSPWNPNHVIEGKLLVEENNTLMV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04378 152 PANTHER - 33 123 IPR010264 -
Vivi2g04378 152 Pfam Plant self-incompatibility protein S1 42 132 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04378 Vivi-Chr2 157967662 157968120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04378 23 133 Carbohydrate Esterase AT3G16970 36.441 7.21e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04378 - - vvo:131650433 216.468