Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04377 ATGGCACTTTCTGCTTCCAAAATTGTCTTATCACTCTCAATGTTGATAACTATTATTGTTTCATTTAAAGTCACAAATGGTCTGAAAACTCAAAGGCTTCCTTGGGCTCCAAATAATATAACTCCACATAGAGTATACATTTCCATTATCAACAACATAAGTGATGTTCAGCTTGGTGTTCATTGTCAAGATAAAAAGCATGATCTTGGGTCTCATTCATTGAAATTTGGAGAAAATTATGCATTTGATTTTCAGCCGGTGGCTTTTTTGCGAATAGCTTTATACTTTTGTCATTTTACATGGGATAATGAGTCTCATTACGTTGACATTTATAATGAAGTAAGAGATCATTATATATGCAGCAAATGTAATTGGAAGATAAATAAATATGCACCATGTAGGACAACTGAGGTATCTGAAATATGTTATACTTGGAGAGATCATGCTATAGAAGGGAAACTACTAGTTGAAGAGAATAGTACTCTTGTTGTGTAA 495 0.3293 MALSASKIVLSLSMLITIIVSFKVTNGLKTQRLPWAPNNITPHRVYISIINNISDVQLGVHCQDKKHDLGSHSLKFGENYAFDFQPVAFLRIALYFCHFTWDNESHYVDIYNEVRDHYICSKCNWKINKYAPCRTTEVSEICYTWRDHAIEGKLLVEENSTLVV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04377 164 PANTHER - 44 136 IPR010264 -
Vivi2g04377 164 Pfam Plant self-incompatibility protein S1 47 145 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04377 Vivi-Chr2 157948812 157949306 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04377 18 150 Carbohydrate Esterase AT3G16970 30.496 3.98e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04377 - - vvo:131650433 345.895