Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04370 ATGGCAATTTCTGCTTCTAAAATTTTCTTATCACTTTCAATGTTGATAACTATTCTTGTTTCATTTCAAATTACAAATGGTCTAAAGACTCTAAGGGCTCCATGGACTCCAGATAGAGTATACATTTCCATTACCAGCAACATAACTGATCTTCAGCTTGGTGTTCATTGTAAAGATAAAAAGCATGATATTGGGTTTCGATCATTGAAATTTGGAGAAAATTACGCATTTGATTTTCAGCCTAAGGCTTTTCTAAGAGCATCTTTATACTTTTGTCGATTTACATGGGCTGATGAATTTCATTACTTTGACATTTATAAGGAAACAAGAGATCATGATATATGCAGCAAATGTAATTGGAAGATAGATAAATCAGGACCATGTAGAGAAACTGAGACATCTGATACATGTTATCCTTGGAACCCTAATCATGTTATAGAAGGGAATAATACTCTTATGGTGTAA 465 0.329 MAISASKIFLSLSMLITILVSFQITNGLKTLRAPWTPDRVYISITSNITDLQLGVHCKDKKHDIGFRSLKFGENYAFDFQPKAFLRASLYFCRFTWADEFHYFDIYKETRDHDICSKCNWKIDKSGPCRETETSDTCYPWNPNHVIEGNNTLMV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04370 154 Pfam Plant self-incompatibility protein S1 49 140 IPR010264 -
Vivi2g04370 154 PANTHER - 41 131 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04370 Vivi-Chr2 157677423 157677887 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04370 18 141 Carbohydrate Esterase AT3G16970 37.681 2.41e-24 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04370 - - vvo:131650433 231.106