Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04315 ACCACCACAGTGGTTACCAGAGAGTACACCATCAACCTCCATAAACGCCTCCATGGATGCACATTTAAGAAGAAGGCTCCTAAAGCCATCAAGGAGATTAGGAAGTTTGCCCAAAAAGCAATGGGAACCAACGACGTTCGTGTTGACGTCAAGTTGAACAAGGCTATATGGAGCCAGGGTATTAGAAGTGTCCCAAGAAGAATCAGGGTACGCATTGCTCGCAAGAGAAACGATGATGAGGATGCTAAGGAAGAGCTCTATTCTCTTGTTACTGTTGTCGAAATCCCCAAGGAGGAGCTTAAAGGTTTGGGCACTAAGGTTATTGATGATGAAGATTAA 339 0.4484 TTTVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKAIWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLGTKVIDDED 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04315 112 SUPERFAMILY Ribosomal protein L31e 4 84 IPR023621 -
Vivi2g04315 112 SMART Ribosomal_L31e_2 2 85 IPR000054 GO:0003735|GO:0005840|GO:0006412
Vivi2g04315 112 FunFam 60S ribosomal protein L31 1 112 - -
Vivi2g04315 112 PANTHER 60S RIBOSOMAL PROTEIN L31 3 111 IPR000054 GO:0003735|GO:0005840|GO:0006412
Vivi2g04315 112 Pfam Ribosomal protein L31e 4 84 IPR000054 GO:0003735|GO:0005840|GO:0006412
Vivi2g04315 112 ProSitePatterns Ribosomal protein L31e signature. 46 60 IPR020052 GO:0003735|GO:0005840|GO:0006412
Vivi2g04315 112 Gene3D - 1 112 IPR023621 -
Vivi2g04315 112 CDD Ribosomal_L31e 4 84 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04315 Vivi-Chr2 157069442 157069915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04315 4 112 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 82.569 4.41e-64 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04315 K02910 - gmx:100499742 200.675