Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04283 ATGGCTTTGGACGCACCTCCTGAAGAAGACAATCCCAAACGCCGAGCGTCCGATCATCCCGACTCACCGGCCTCATCAAAGAAACGAGAAGTGGTCGGCGAAATCGCCAATCTCGACATCCAGAGCCCATCCACAAATGGAGAGAGCTCCTCGACCGAGGAGAGCAAGCAGCTTTCTCCTTGTTCCATCTACAGGTATCTACACGCCATTGAGATGGATGAGAATAAGAGGCCATTAGGGAATTACATTGGAACAGTTCAGAAAAGGATGACAAATGATATGCGTGAAATTCTCATTGATTGGTTGATCGAGGTTACGGAGGAATTCAAGCTTATTTCCGATACTCTTTATATCGGCGTTTGTTGCATCGATCGTTTCCTCTCTGTTCGTCCTCTCGACAAAAACTACCTCCAGCTTCTCGGCATTACTGCCATCCTCATTGCCTCGAAGCAAGCTGATATTTCTCCTCCACCCGGGGAGCGACTGTGCTTTATGACGGATAATACTTACGCCATCTCCGAGGTTATACAGATGGAGAAGGACGTTCTTGAATGTTTGAACTCTGATTTATGCTATCCCACCTCTAGAAATTTTCTCAGAATTTTGATTGGAATTTTTCACAGTCATACTAATACTCTGCGTTGTACCAAGCCATTCGATTACTTGGTCTCTAAGAAATATGACCAGCAAATGGAATTCTTGGCTTGTTATCTTCTGGAGTTATGCCTATTATCATCAAAATGCATCAAGTTTTTACCTTCCATTGCTGCTGCTTCCGCAATATTTCTGTCGAGGTTTATACTTGAACCAAAGGATCACCCTTGGACTCAAGAGTTAGAATGCCGATCAGGATATAAGGCAAGTGACCTGCAGGAATGTGTCCTTGCAATACATGATGTGCACTCCAATATCTCTGAGTGGCATGTACAAGCAGTCCGGGAAAAGTACATGAAATCTAAGTTTATGAGTATGGCATCTATGACTGCGGTAGAAGTTCCTGCAAATTATTTCGAGTCTATTGATCAATAA 1029 0.4373 MALDAPPEEDNPKRRASDHPDSPASSKKREVVGEIANLDIQSPSTNGESSSTEESKQLSPCSIYRYLHAIEMDENKRPLGNYIGTVQKRMTNDMREILIDWLIEVTEEFKLISDTLYIGVCCIDRFLSVRPLDKNYLQLLGITAILIASKQADISPPPGERLCFMTDNTYAISEVIQMEKDVLECLNSDLCYPTSRNFLRILIGIFHSHTNTLRCTKPFDYLVSKKYDQQMEFLACYLLELCLLSSKCIKFLPSIAAASAIFLSRFILEPKDHPWTQELECRSGYKASDLQECVLAIHDVHSNISEWHVQAVREKYMKSKFMSMASMTAVEVPANYFESIDQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04283 342 SMART Cyclin_C_2 193 330 IPR004367 -
Vivi2g04283 342 Pfam Cyclin, C-terminal domain 193 328 IPR004367 -
Vivi2g04283 342 SUPERFAMILY Cyclin-like 65 190 IPR036915 -
Vivi2g04283 342 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
Vivi2g04283 342 FunFam G2/mitotic-specific cyclin 78 187 - -
Vivi2g04283 342 MobiDBLite consensus disorder prediction 7 34 - -
Vivi2g04283 342 FunFam Cyclin A1 188 326 - -
Vivi2g04283 342 MobiDBLite consensus disorder prediction 1 56 - -
Vivi2g04283 342 Pfam Cyclin, N-terminal domain 63 191 IPR006671 -
Vivi2g04283 342 PANTHER CYCLINS 57 316 IPR039361 -
Vivi2g04283 342 SMART cyclin_7 100 184 IPR013763 -
Vivi2g04283 342 SMART cyclin_7 216 299 IPR013763 -
Vivi2g04283 342 MobiDBLite consensus disorder prediction 38 56 - -
Vivi2g04283 342 Gene3D - 76 191 - -
Vivi2g04283 342 Gene3D - 63 326 - -
Vivi2g04283 342 SUPERFAMILY Cyclin-like 223 329 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04283 Vivi-Chr2 156607791 156610055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04283 13 341 Core Cell Cycle Gene Families AT5G43080 39.831 3.38e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04283 K06627 - tcc:18608037 285.419