Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04242 ATGTCTTTCCATACTGAGAGACTAGAGCCGAGAGAGAAAGAAATATTTCTGCATATTGCTTGTTTCTTTAAAGGGGAGAAGGTGGATTATGTGAGGGGAGTTCTAGATGCTTGTGGATTGCACCCTGATATTGGAATTCCACTTATTGTTGAAAAATCGTTCATAACAATTAGAAACAAGGAAATTCATATGCATGGAATGTTGCAAGAGTTGGGGAAGCAAATTGTTCGGGGACAACATCCGTACGACCCAGAGTTCTGGAGTAGATTGTGGCTTTACCAGGATTTCCATCGCGTGGCGATGACAAAAATGAAAGCACCGATAGAAACTAAAGCCATAGTTCTAGATCAAAAGGAGGATGGCTTAGAATTCAATCAGTTGAGGGGTGAAGATCTATCAAAATTCGGAAGCCTGTATTTCTTTCTAATTCCCTATGTTATCTTTCCGTGGAATGGTTATCCTTTCCCTTCTTTGCCTTCAAATATTCAGCTACATAACCTCGTCGAATTGAATATGCCTGGCAGCAACCTCGTCGTATTGTGGGAAGACAGTCAGCGTCTACCTTGTTTGAAAAGGATGGATCTGAGCAACTCCAAAGAATTAATGGTAACTCCAAATTTTGAAGGGATCCAAAATCTGGAGCGGATAGATTTTACAGGATGCATAAACCTGTTGCAAGTGCATCCATCAGTTGGACTTCTTACAGAACTTGTATTCTTGAGTTTGCAGAACTGTACCTGTCTCACCAGCCTTGATTTCGGCAGTGTATCAAGAGTATGGTCTCTCAGAGTTCTGCGTCTCTCTGGTTGCATAGAATTGGCAAAGACTCCAGATTTCACAGGAGCATCAAATCTTGAGTACCTTGATATGGATCGATGTAAAATTTTATCTGAGATCCATAAATCTATTGGGGCTCTTACAAAGCTTAGATTCTTAAGTTTCAGAGACTGCACAGAGTTGTTTCCAAATCCTAACATCTTTGATAATATGACATCTCTTACGTCTCTGGATCTACGTGGCTGTGGGAGATTTTCAACTCTGCCCCTGCCAAGCACCACCCTCAATTCTCCTTCTCCTCTGGAATCATTGATTTTCCTGGACTTAAGCTTTTGCAACATTTTGGTAGTACCTGACTCTATTGGAGACTTAAAGGGTTTAGAAAGACTAAATTTACAGGGAAATAGGTTTAGCACACTTCCTACTACATTCAAGAGGCTTTCCAATCTAGCATATTTAAACTTGTCACATTGTCACAAACTTAAAAGATTGCCAAAGCTCTCATCCAAGAGTGGCCAATCAGATTCACTGGAAAGGTATTTTACAACAACATCTGGATCGCGTGATCATAGGTCTGGATTATATGTTTATGACTGTCCCAGGATAGCTAAGCGGTTTGCTCTTGAGGATCTAGACATTCCATTTAAATGGCTAAAAAGACTATTAAAGGAACCTCGTCATTTTCGATGTGGCTTTGACATTGTTCTTCCTTTGCATGGTAAATATGTTGATTCACATGGAAACCCTTCAATTCCACAGTGGTTCAACCACCAGTTTGAGGAAGGTTCAGTAATAAGGATAAATAACTCTGATATGCAAGTTGATTGGGCTGGCTTTTCCTTTTGTGTAGCATTTCAAGTAGATATCCGCCAAGCAGTAACTGACTTACATCGTCATTTTCATTTGCCACCGTCAATTCCTTTTTTTCTTTCTTTTGAAAGTGAACACACAGAAGAATGCTTTGATATGCCGCTTAGTTTGGAACGAAATAAGGTGGCTAGCTCAAATTATATTTGGGTAATCTATATCTCTCGTGAACACTGCCATTTTGTGAAAACAGGAGCAAAAATCACATTTAAAGCTGGCAGTGGTTTGACTATGAAGAAGTGGGGGTTCCGTGTGCTAACCAAGAAGGGCGTAGAAAGGACACCGAGAACACAACTTCCGTTGTTGTCCATTGAGAATGTAGATGAAAGAAGCAGCAGATTTGAGGGTAAAATCAAGCTTCCTTACAATTGGTTAGTTTCTTCTGAAGATGAAGTTGAGAATGATGAAGCCAAGGGAAAAGAAATCAATCTCTTTAATCTAGGCCTTTTGACAGGCCAACTACACTTCCATTTATAA 2121 0.3998 MSFHTERLEPREKEIFLHIACFFKGEKVDYVRGVLDACGLHPDIGIPLIVEKSFITIRNKEIHMHGMLQELGKQIVRGQHPYDPEFWSRLWLYQDFHRVAMTKMKAPIETKAIVLDQKEDGLEFNQLRGEDLSKFGSLYFFLIPYVIFPWNGYPFPSLPSNIQLHNLVELNMPGSNLVVLWEDSQRLPCLKRMDLSNSKELMVTPNFEGIQNLERIDFTGCINLLQVHPSVGLLTELVFLSLQNCTCLTSLDFGSVSRVWSLRVLRLSGCIELAKTPDFTGASNLEYLDMDRCKILSEIHKSIGALTKLRFLSFRDCTELFPNPNIFDNMTSLTSLDLRGCGRFSTLPLPSTTLNSPSPLESLIFLDLSFCNILVVPDSIGDLKGLERLNLQGNRFSTLPTTFKRLSNLAYLNLSHCHKLKRLPKLSSKSGQSDSLERYFTTTSGSRDHRSGLYVYDCPRIAKRFALEDLDIPFKWLKRLLKEPRHFRCGFDIVLPLHGKYVDSHGNPSIPQWFNHQFEEGSVIRINNSDMQVDWAGFSFCVAFQVDIRQAVTDLHRHFHLPPSIPFFLSFESEHTEECFDMPLSLERNKVASSNYIWVIYISREHCHFVKTGAKITFKAGSGLTMKKWGFRVLTKKGVERTPRTQLPLLSIENVDERSSRFEGKIKLPYNWLVSSEDEVENDEAKGKEINLFNLGLLTGQLHFHL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04242 706 Gene3D Ribonuclease Inhibitor 280 482 IPR032675 -
Vivi2g04242 706 Gene3D Ribonuclease Inhibitor 151 279 IPR032675 -
Vivi2g04242 706 Pfam Leucine rich repeat 366 418 IPR001611 GO:0005515
Vivi2g04242 706 SUPERFAMILY L domain-like 147 425 - -
Vivi2g04242 706 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 261 348 IPR044974 GO:0006952
Vivi2g04242 706 Pfam Leucine Rich Repeat 166 185 IPR011713 -
Vivi2g04242 706 Pfam C-JID domain 509 638 IPR045344 -
Vivi2g04242 706 SUPERFAMILY "Winged helix" DNA-binding domain 8 97 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04242 Vivi-Chr2 155978628 155981324 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04242 6 347 WRKY Transcription Factor Family AT5G45050 30.867 1.74e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04242 - - vvo:131650412 1424.84