Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04235 ATGGAGAAAGATAAAATTTCTTCAGCTATGATAATGATAATCATTTTAATGCTAAAATCTATCCACTTTGTTTCTGGTACAGACAATCCTATAGATACATATTGTCCTGATAATTTTCCACTTTACACTTCCAACACTTCATTCGACAAGAATCTCAAACTTCTCATGGAAACTCTATCTTCCAACATAGTAGCTTCAAACACAAGTTTCTTCAACAACACGTCATCGGGAGAAGGACTAGACAAAGTTTATGGACAAGCACTATGCAGAGGGGACGTAACAAATTCCACAGTTTGCAAAGAATGCATTGAGAAAGCGAGTAAGGATTTAATGAATAGGTGTAAGAGTGAGGATGCAATGATATGGTATGAACTTTGTCAAGTTCGGTATTCGTTTCAGATGTTCTTTACAAACGCGGTTTATACTGGAAAATATCCTAAGCAGAATGATCTAGAGAAGCATGTTTCAGATCCTATTAGTTTTCAACAGGTTTTGAATTATTTAATGAACAATATCTCAAATGAGGCTGCTTTTAGTCCTTCGAAGAACATGTTTGCAACAGCAGAAATCGAATTTTCTGTCAAGAAAAGAATTTATGGACTTGTCGAATGTACGAAAGACATTTCTGAAACTGAATGCAGAAGTTGTTTGAGTTCTGCAATCACGGAACTCAATCAATGCTGCTCAGACAGGGAAGGGGGGATTATTGTTAGTCGCAACTGCAACGTTAGATTTGATCTGTTTGAGTTTTTTAATGCTTCTTCATCATCAGTATCCCTTTTGATTTTCCCAACTTCCAAAGAAGGAAAATGGAAGCCTTGGATGTTTATCTTGACTATAAGTGGCTCGGTTTTAACATTAGCAGCTATTATTGGGTTGTGCAGTACTTGCCTCATGCGGAAAAAGGACAGAGAAAGAGACGGAGAAAGAAGCGAAAGGACGCTATTACAAGAGTTGTCTGGCCATAAGAATGTAGCAATCACACAAGAAGGTCAATTGGTTAGTTCTGATGAAATGAGGTTTATGACGTTAGCAACTATTAAGACGGCTACCAGTGACTTTTCGGATATAAATAAGTTGGGACAAGGAGGGTTTGGTGTGGTCTACAAGGGTGTTCTACCAGATGGTAATGAAATAGCGGTTAAGAGATTGTCGAGAAAGTCTTGGCAAGGTATAGAAGAATTAAAAAATGAGGTCATTCTAATAGCAAAACTTCAACACAAGAATTTGGTGAGATTGTTGGGATGTGTCTTAGAAGAAGATGAAAAGATACTCATATACGAGCTTATGTCAAATAGAAGCCTTGATCAATTTATATTCGATCCAAACAAACGTCCTAAACTTGACTGGAACACATGCTATGGCATCATCGGCGGCATAGCAAGAGGACTACTCTATCTACACGAGGAATCTCGACTTAAAATCATTCATCGCGACCTAAAGCCAAACAATGTGTTGTTAGACCATGAGTTAGTAGCAAAAATATCAGATTTCGGTATGGCTAGAATGTTTTCTGAGAATCAGAATACAGCAAACACAAAAAGAGTTGTGGGAACACATGGATATATGGCTCCAGAATATGCAATGGAGGGACTATTCTCAGTGAAGTCTGATGTCTTCAGCTTTGGCGTAATTATGCTTGAAATCATCAGTGGGAAAAGAAATAGCGGATTTTACATAACCGAACTTGCCCCAACTCTCCTAGCATATGCTTGGAGGATGTGGAATGAAGGAAAGGGATTAGAAGTTGTGGATCCTATATTATTAGAATCATGTCTTGATTCTGAATTTGAAGTTCTTAGGTGCATTCATGTTGGGCTCTTGTGCGTACAGGAAGACCCGCAACACAGGCCCACCATGTCCAATGTTATGGTTCTCCTAGGAAGTGAATCAATGGTTCTTCCCCAACCAAGACAACCCGCATTTTCTGTAGGTAAGATGATTCGTGGAGATCCTTCAACATCAACAAATCGTTCGGCGAATGAGAGTATATGGTCTAGTATTTCACCGCGATGA 2016 0.3869 MEKDKISSAMIMIIILMLKSIHFVSGTDNPIDTYCPDNFPLYTSNTSFDKNLKLLMETLSSNIVASNTSFFNNTSSGEGLDKVYGQALCRGDVTNSTVCKECIEKASKDLMNRCKSEDAMIWYELCQVRYSFQMFFTNAVYTGKYPKQNDLEKHVSDPISFQQVLNYLMNNISNEAAFSPSKNMFATAEIEFSVKKRIYGLVECTKDISETECRSCLSSAITELNQCCSDREGGIIVSRNCNVRFDLFEFFNASSSSVSLLIFPTSKEGKWKPWMFILTISGSVLTLAAIIGLCSTCLMRKKDRERDGERSERTLLQELSGHKNVAITQEGQLVSSDEMRFMTLATIKTATSDFSDINKLGQGGFGVVYKGVLPDGNEIAVKRLSRKSWQGIEELKNEVILIAKLQHKNLVRLLGCVLEEDEKILIYELMSNRSLDQFIFDPNKRPKLDWNTCYGIIGGIARGLLYLHEESRLKIIHRDLKPNNVLLDHELVAKISDFGMARMFSENQNTANTKRVVGTHGYMAPEYAMEGLFSVKSDVFSFGVIMLEIISGKRNSGFYITELAPTLLAYAWRMWNEGKGLEVVDPILLESCLDSEFEVLRCIHVGLLCVQEDPQHRPTMSNVMVLLGSESMVLPQPRQPAFSVGKMIRGDPSTSTNRSANESIWSSISPR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04235 671 Pfam Protein tyrosine and serine/threonine kinase 358 624 IPR001245 GO:0004672|GO:0006468
Vivi2g04235 671 Gene3D Transferase(Phosphotransferase) domain 1 430 633 - -
Vivi2g04235 671 ProSiteProfiles Protein kinase domain profile. 354 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g04235 671 MobiDBLite consensus disorder prediction 644 671 - -
Vivi2g04235 671 Gene3D - 31 135 IPR038408 -
Vivi2g04235 671 Gene3D - 146 250 IPR038408 -
Vivi2g04235 671 CDD STKc_IRAK 360 623 - -
Vivi2g04235 671 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Vivi2g04235 671 SUPERFAMILY Protein kinase-like (PK-like) 334 626 IPR011009 -
Vivi2g04235 671 FunFam Cysteine-rich receptor-like protein kinase 10 317 429 - -
Vivi2g04235 671 Gene3D Phosphorylase Kinase; domain 1 316 429 - -
Vivi2g04235 671 FunFam Uncharacterized protein 430 633 - -
Vivi2g04235 671 MobiDBLite consensus disorder prediction 649 671 - -
Vivi2g04235 671 FunFam Cysteine-rich receptor-like protein kinase 10 146 250 - -
Vivi2g04235 671 Pfam Salt stress response/antifungal 156 246 IPR002902 -
Vivi2g04235 671 Pfam Salt stress response/antifungal 41 132 IPR002902 -
Vivi2g04235 671 SMART serkin_6 354 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g04235 671 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Vivi2g04235 671 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Vivi2g04235 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Vivi2g04235 671 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04235 Vivi-Chr2 155936300 155939269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04235 31 644 Receptor kinase-like Gene Family AT4G23230 41.242 2.08e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g04235 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04235 - - gmx:102669229 955.666