Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04233 ATGTCAAATACATGGAGATGTAAATTGTTCTCATCATTAGTAACATTGTTCATAATTTCATGTTGTGTCTATGTATGTGAAGGTCAAGATCCAATAGCAGTGGCTCTCCCTCCGGCCGCGGAAACATGTAACGGAGTTTATATTTCCTACCAACTACTCGGTCGACGGAAGGAGTTTCCTCGCGTCAAGAACGTCACGGCGCAATCTTGGGCCTTTAATGCGACCGCGAAAGTTCTCAACACGGGGAAAGATGTTCTTAAATCATGGAAGTTGTTTATAGGATTTCAACATGATGAGATCCTTATCTCCGCCGACGGAGGTATCCCGTTTGAGGCGGGAGAGCTTCCGGCTGAGGTCGGAAATGGAACAACCTTAGTTGGAAGTAATGTACCAGATTTAGAAACTTCTATTAATACAGCTAATGATTTGACCCAAATTCAAGCATTGATTAAAATTGCTGGTACACAGTTTGGAGTTAAGCCACCTGGAGTTCCAATGCCTAAAAGCATCAAGTTAGACAATGATGGATATAGGTGCCCTCGAGCGAGTACTAAGAAGAGAATAATGCAGGCATGTTGTAAAAGAGATCCGAAATTCAAAAAAAAACTTCTAAAGACAAAATTCATACCGCGTCAAAAAGGCGACCTAACAATATCCTATGATATTCTTCAAGCATATGACAACAACTATCTTGTTCAAGTAACAATGGAGAATAATAGTCCTTTTGGACGTTTAGATCGTTGGAACCTAACATGGGAATGGACAAGAGGTGAATTCATACAACAAATGAAAGGCGCATTCACGCGTGAGATCGATTATACAGGTTGCATCTATGGTCCTCCTGGAGAATATTACAAAGACATGGATTTCTCTAAAGTTATGAATTGTCAAAAGCATCCTGTGATCAGTGATATGCCACCGGAGAAATATAATGATACTGAACTTGGTAAGATACCGTTTTGTTGTCGAAACGGTTCGCTTTTACCTATAATCATGGATCCATCACAATCCAAATCCATTTTTCAAATGCAAGTTTTTAAATCTCCACCTGATTTGGATAAAAAATCTCTATTCCCACCAGCAAAATGGAAAATAACAGGTGTTCTTAACCCTGCTTATCAATGTGGACCGCCGTTGAAAGTCACACCGACGGTATTTCCAGACCGTAGAGGACTTGATGCAATAACCTATGCTATTGCAAGTTGGCAAATAATTTGCAACATTACAAAACCTAAACAAAGAAAAACTAGATGTTGTGTTTCCTTTTCTGCTTTCTATAATGAATCTATTGTTCCATGCAACACGTGCGCGTGTGGTTGCGATGAAGACGAAGATAACGGCCGTTGTAACCCTGATGCACCAGCAATGCTTTTACCTTCAGAAGCACTTCTTGTTCCTTTCGAAAATCGAACAAAGAAGACCGTTGCTTGGGCTAGGTTAAAGCATTTACATGTACCTAAGAAGTTACCATGTGGCGATAATTGCGGAGTTAGCGTAAATTGGCATGTAGCTTCTGATCATAAAGGTGGTTGGAGTGCAAGAATCACTTTGTTTAATTGGAAGCCTCTTCCTTTTAAGGACTGGTTCACTGCCTTGCAGTTCAAGAAAGGTGTTTCTAATGGTTTTGAGAAAGTTTATTCTTTCAATGGAACATTGCTAAGAACATTCAATCACACTATTTTCATGCAAGGAATAGAAGGATCAAACTATTTGATAGGTCTAGATAATGATACAAATCTAAAGGTTCCTGGGAAACAACAATCTGTTATTTCTTTTACAAAAAAGTTTATGCCATTTATGAAAATACCTAGAGGTGATGGGTTCCCTACAAAGGTGCTTTTCAATGGAGAAGAGTGTTCTCTTCCAAATCATTTTCCTATGAAAAATGGAAACCAACATAATGTATATTTAGTAAAAGAAGTGTTGATCTTAGTTTTAGCTTTTACCATGATTCAAATATTGTATTAG 1968 0.3857 MSNTWRCKLFSSLVTLFIISCCVYVCEGQDPIAVALPPAAETCNGVYISYQLLGRRKEFPRVKNVTAQSWAFNATAKVLNTGKDVLKSWKLFIGFQHDEILISADGGIPFEAGELPAEVGNGTTLVGSNVPDLETSINTANDLTQIQALIKIAGTQFGVKPPGVPMPKSIKLDNDGYRCPRASTKKRIMQACCKRDPKFKKKLLKTKFIPRQKGDLTISYDILQAYDNNYLVQVTMENNSPFGRLDRWNLTWEWTRGEFIQQMKGAFTREIDYTGCIYGPPGEYYKDMDFSKVMNCQKHPVISDMPPEKYNDTELGKIPFCCRNGSLLPIIMDPSQSKSIFQMQVFKSPPDLDKKSLFPPAKWKITGVLNPAYQCGPPLKVTPTVFPDRRGLDAITYAIASWQIICNITKPKQRKTRCCVSFSAFYNESIVPCNTCACGCDEDEDNGRCNPDAPAMLLPSEALLVPFENRTKKTVAWARLKHLHVPKKLPCGDNCGVSVNWHVASDHKGGWSARITLFNWKPLPFKDWFTALQFKKGVSNGFEKVYSFNGTLLRTFNHTIFMQGIEGSNYLIGLDNDTNLKVPGKQQSVISFTKKFMPFMKIPRGDGFPTKVLFNGEECSLPNHFPMKNGNQHNVYLVKEVLILVLAFTMIQILY 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04233 655 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Vivi2g04233 655 PANTHER COBRA-LIKE PROTEIN 7 7 651 - -
Vivi2g04233 655 Pfam COBRA-like protein 230 409 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04233 Vivi-Chr2 155929344 155931441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04233 12 651 COBRA Gene Family AT3G20580 55.878 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04233 - - gmx:100799716 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04233 2 155929344 155931441 Vivi2g04233 2 155929344 155931441 ECH