Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04225 ATGGAACACACGATCGTGACTGTGCTTCTTCTCCTTATGCTTCTTCTCATCTTCATCTTCCTCTTTTTTCTCTTCAAACCATGGCGCTTCTTTTTCTCTTCTCGTTTTCGTTCTTCAATCCAACAGGGTTCTGTTGGTGAATTAGAGAGACCTCTTGTTGTTGACGACGGTGGAAATGCTTCGTTGAATAATGAATTGCCGAGGGATTATGATCTTGAAGGTGCGTGTTATCCTAATGAAGTTAATTTTCGTTCTCCGAGAACTCATGGACAAGGTCTTGTTCATAAGCAAAGGCTTCATAACCTTTCTATTTCGCCTAATTTGCATCAAGGTGGCGGCGGTGGTGGAGGTGGTGGAGGTGATACTTTGATTGTTGATGTAATCTCTGATCATTCTGAGAGTGTTGTTGCTGCTGCTGATGTTGGTCAAGTATTTAAGCTTCCTCCTCCGCCGGTTTTAGCTCAAGTTCCGAAGCAGAGTTATCAGAATGATAGGTTGCAGGATTTTGTGCAAAAGGATATCACTGATCAAAGAAGCTGCCTTACTTTGGAGGTAATCAGTGGTCCTTCTTCCGGACAACGCTGGTATGTTCAGTCGACAAATCCTTCTCGTCTCCCGCTGACTTTGGGAAGGGTTTCTCCTAGTGATTTGTTGATCAAGGATACGGAAGTGTCGGGGAAGCATGCTTTGATCAATTGGAATTTGGATAATTTGAAATGGGAGCTGGTTGATATGGGTAGCCTGAATGGAACACTTTTGAATTCGAAGTCAATCAACCATCCTGACACTGGAAGTAGGCACTGGGGAGATCCAATGATTCTTGCTAATGGAGATGTTATAACACTTGGAACAACATCAAAAATAATTGTTCATATTACTTCCCAAAATCAGCATCACATTCCCTTTGGAGTTGGTATGATATCAGATCCCATGTCTTTGCGTCGAGGAGGAAAGAAACTTCCTATGGAGGATGTTTGCTATTATCATTGGCCTTTACCTGGGCTGGATCAGTTTGGTATTTTTGGCATTTGTGATGGGCACGGTGGTGATGGGGCTGCTAAAGCTGCTAGCAAACTTTTTCCTGAAGTAATTGCTAGTATATTATCGGATTCATTAAAAAGGGAGAGGGTTTTCTCACTTCGTGATGCTTCGGATATTCTTCGAGATGCATTTTCTCAAACGGAAGCACGCATAAACAACTTCTATGAGGGATGTACAGCAACATTGCTTCTGGTATGGGCTGACTGTGATGATAATTTCTATGCACAATGTGCAAATGTTGGAGATTCTGCCTGCATTATGAGTGTTGATGGGCAACAAATCAAAATGACAGAAGATCACAAGATAAGCAATTATTCTGAAAGACGCAGAATTGAAGAGTCGGGGGAACCATTGAAAGATGGGGAAACACGACTATATGGTATAAATCTTGCAAGGATGCTCGGCGACAAATTCCTAAAACAACAGGATTCTCGGTTCAGTTCACAACCTTATATAAGTGAGGCTGTGCATATTCACCAAGCAAGCAAGGCTTTTGCTGTTCTAGCTAGTGATGGGTTATGGGACGTCATCAGCATGAAGAAGACAATTCAGCTAGTGCTTCAGATGAGGGAGCGATACAATACAGAAGGAGATAATACAGCAGAAAAGATTGCTAGTTTGTTGTTGAATGAGGCTAGAACACTCAAAACGAAGGATAATACCTCCATAATATTCTTAGATTTTGATACATTCAATAGATTCTCTTGTAAAGTTGAATCCTAG 1764 0.4161 MEHTIVTVLLLLMLLLIFIFLFFLFKPWRFFFSSRFRSSIQQGSVGELERPLVVDDGGNASLNNELPRDYDLEGACYPNEVNFRSPRTHGQGLVHKQRLHNLSISPNLHQGGGGGGGGGGDTLIVDVISDHSESVVAAADVGQVFKLPPPPVLAQVPKQSYQNDRLQDFVQKDITDQRSCLTLEVISGPSSGQRWYVQSTNPSRLPLTLGRVSPSDLLIKDTEVSGKHALINWNLDNLKWELVDMGSLNGTLLNSKSINHPDTGSRHWGDPMILANGDVITLGTTSKIIVHITSQNQHHIPFGVGMISDPMSLRRGGKKLPMEDVCYYHWPLPGLDQFGIFGICDGHGGDGAAKAASKLFPEVIASILSDSLKRERVFSLRDASDILRDAFSQTEARINNFYEGCTATLLLVWADCDDNFYAQCANVGDSACIMSVDGQQIKMTEDHKISNYSERRRIEESGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSQPYISEAVHIHQASKAFAVLASDGLWDVISMKKTIQLVLQMRERYNTEGDNTAEKIASLLLNEARTLKTKDNTSIIFLDFDTFNRFSCKVES 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04225 587 CDD PP2Cc 315 575 IPR001932 -
Vivi2g04225 587 SMART FHA_2 206 258 IPR000253 GO:0005515
Vivi2g04225 587 ProSiteProfiles PPM-type phosphatase domain profile. 303 575 IPR001932 -
Vivi2g04225 587 FunFam Protein phosphatase 2C 70 311 582 - -
Vivi2g04225 587 ProSiteProfiles Forkhead-associated (FHA) domain profile. 207 258 IPR000253 GO:0005515
Vivi2g04225 587 SUPERFAMILY PP2C-like 313 576 IPR036457 -
Vivi2g04225 587 SMART PP2C_4 297 573 IPR001932 -
Vivi2g04225 587 Gene3D - 175 311 - -
Vivi2g04225 587 Pfam FHA domain 208 283 IPR000253 GO:0005515
Vivi2g04225 587 PANTHER PROTEIN PHOSPHATASE 2C 314 572 IPR015655 GO:0004722|GO:0006470
Vivi2g04225 587 CDD FHA_PP2C70-like 181 291 - -
Vivi2g04225 587 SUPERFAMILY SMAD/FHA domain 179 290 IPR008984 GO:0005515
Vivi2g04225 587 FunFam Protein phosphatase 2C 70 176 310 - -
Vivi2g04225 587 Pfam Protein phosphatase 2C 315 568 IPR001932 -
Vivi2g04225 587 ProSitePatterns PPM-type phosphatase domain signature. 340 348 IPR000222 GO:0043169
Vivi2g04225 587 Gene3D - 312 583 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04225 Vivi-Chr2 155706007 155712883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04225 23 577 PP2C-type Phosphatase Gene Family AT5G19280 56.014 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04225 K01090 - gmx:100170642 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04225 2 155706007 155712883 Vivi2g04225 2 155706007 155712883 ECH