Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04135 ATGAGGCTTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCCGGCAGAAGAGTTTTCTGATGAAAACGGCCGCTCAGGGGAGGCTGGTCAGAGTTCTATGAATGAGGGTAATGTACATTCTCTTAGTAGCAGAGCTTGTGAAAACTTGCAGCTTGATGTCGGTGAAACAAGTAATATGCTCAGTATTAATTCAAGTCATGATTCTCTATCTGAAAATGCCGAGAGTAGACAGATCTTGAAGAATAAGTATCAGGATCCCAAACACTTAGAAGGTCATGATGACAACACATCTTGTATCAGTAGAGCATCTAATGCCAATTTAGTAAATGATAACCATCAAAGGAATGCAAACAGAATAAATATACCCTGTAGTTCAGCTTCAGCTAGTCAATTTGGGGCCGAACGATCTGGAACTGCTCCATCTGTTGATATGTCTTGTTTGGAGACTCCATCTCCTAAAGATGTAGACACTGACCATAGTTCGCCTACAATACAAGGGCAACATGGACAATCTCGAAATGATGAATCTCTTTCAGATAATCCAAGCTTAATGCACATGGAAAGGGAGTCGAATTCTCAGATACCAGAAAAAATGTCAGAACGCTCTATAGAGAATTGCAGTTCATCATTAACCAAAGAGAGTGCACCCGTTGTTGTTTCTGGTGAGAAATGTACTACAAATAAGGATAAACTTATTGACGACACTTCCAACGTTTCTCTAAAAGTATGTCCAAAGTCACAAGCAGATCCTGATAATGATGTTTGTGATGCTAAAGTTGAAGACTCTAAATGTTCGGTCCATTATGGACATCACGAGAAAGCTGAAGAGCTGATTAAATCACCTGGCAAGCAGGAATCTCAATCTGAAAATGAGAGTGACGAATCAGATGTTGTGGAACATGATGTCAAGGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTTGTAGGTGCACTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAACTCCCTGAAGGGGATTGGTTCTGTGAAGAATGCCAAGATGCAGTGGAAGCTGAAAACAAGAGGCTGGATGCCGAAGAAAAAAAAATCATAAAAACTACTTCAATGTCTCAAGTTTCTGGCAAAAGACTTTCCGACAACATTGAAGTGGCTCCTCCAGCAGCAAAAAGGCAAACTCTTGAATCAAGCAAAGGATCACCAAAGGCTTCAAGCCCCAAGAAATTGGTTACACTGTCACGAGAATCTTCATTTAAGAGCTCAGATAAATTAAAAGGGAAGTCTGGTCTTCTGATGCCTCTCCGAAACCTCCCTGGTGGTGACGATACACATCCCACTCGATCTTCTTCCATTGGTCCCCGGGGTCAAATTTCAAAGAGTATGTTGTTGAAGTCTAATTCATCCAATAACTTAAATTCCAAGCCTAGAGTAAAAAATGTTGATGAAATATTTCCACCAAGACCAAAAGGAGGCAGTGAACAGACTTCTAAGAATATGGAGCCATCTCCTCGGATAACAAGCAGGTCGACATTATTCAAATCTTCTAGTTTGGGGCGATCAAGTGCAATTGAATCAAAAGTTAAAATGCTTTCACCCAAGTCTGCAACTACTCAGGACTTGAAAGGCTCTAGACATTTAAAAGAATCAGGTGCGTTTGATCGAAAATATCTGTCTAGGAATGACCGGCATGTGGCTAGTTCTGCTGTTTCCACACCTAAGGGTGATCAGAAGCTTACTCCTCGGGGTGAAGCCATTATTAAACCTTCAGCAGCTAATAATCGAGAGTTGAAAATTAACCAGGATGGAAAATCAAATGCGCCATCAAAGTCAATGAACAATATAAGCCGTAAAAGTTTGGAGCCTCAAGGTAGTTCAGAGAGAACATCATCCAGTAATGATGAAGCTGTACAGGATGCACTGCCTCGATCTCGAGAGACAGCAAATCAGGTTGAGAAATCCAGAGAGAGTATTAGTAATCGTGTAAGACCCGTTGTCCCCACTGCACTAAAAAGTCCATTTTGTCAAAAATGTGAGGAATTTGGCCATTCTATAGAATGCTGCACAGCTGGTACTCTACAAGAATCTGGTTCTGAATTATCTGTTGCCGCCTCAAGTATCTCAAAAGAGGAGGTGCATAAAGACAATAAACTGAAAGCTGCAATCCAGGCGGCTGCTTTACTTAAAAGACAAATTTACAGGAAGAAAGAAGTAACCAGTCAAATTGATGAAATTTCTACATTAGGCACAGAGTTGAATTGTGAAGTGACTTCACAAGACCGAGTGTTGGTTTCTAACACACACAAGAATAGTATATCCACTGAAGAAACTCATGAACAGCAAGAAGGCCTTGAAAATTCTACATCTGATTCTTCCAAATGTACATCTGCCAGTGATTTGAAGAAACTCAACTCTAGCTCAACTGATCTTTGTACCCAACTAGGAAAGTCGGGTTTAGTTGATCTTAATGCTCTAAAGCCTTTATTGAGAGACCTTTCTAAAAAAGATGTGGCAATCTCAAATGTTCTTTCAAAGATGTTGGCCTTTCCTGAATACGAATACATATGGCAGGGTGTCTTTGAAGTGCATAGAAATGAAAAGTCTCCAGAATTATATTCTGGAGTTCAGGCACATTTATCCTCTTCTGCATCTCCTAAGGTTCTTGAGGCACTGACCAAGTTTAATCCCGAAGTTTCTCTCAACGAAGTTTCTCGCTTGAGCACATGGCCGTCACAGTTTCATCATGGTGGTGCTAGAGAAGATAATATTGCTCTTTATTTCTTTGCCAGAGATGTTGAAAGCTATGAGAGACACTACAGGGGACTATTGGATCACATGATTCAAAATGATTTAGCACTTAAAGGAGTTTTTGATGGTGTTGAACTTCTCATATTCCCATCCAATCAGCTTCCGGAAAGTTCACAACGCTGGAATATGTTGTTTTTCTTATGGGGTGTATTTAGAGGGCGGAGGACTAATCATTCAGGTTCTGCAAAAAAGATCTGTATTCCAAGTTTAAATGCACTGCCAGTTGAGGAAAATTCTTCAACTGCTGATGTGACATTGTCTGAGCATTTTTTGTCAAAGGGCGTCAATGAAAAATCAATTAGTTCTGACAAAGCATGCAATGCACTTCCTTCGTTCACTTCCATAGATCAATATCCGTTTACTGTAAGTAGGAATACTGATATCAATAGCCAGACACAGTTGTGTTCACAACAAGTAAGCTCAGAGAAGCCAGATGGTAGAATTGATAGCAACGCTTCATCAAGGGTTCCAAAAAGCTGTAACCATTTATGTCAACCAACGAAATCCACTGGTTCATCCCTGGAAGCTAGTGTACTTGAGGATGAACAGTGCAGAGAGTCTAAACCTCCTGAAGAATTGGGAACAAGTGTAAGTAGCAAGATGGTGGAAGCAAAAACTGATTCTGCTATTTCTGACAAGCAAGAGAATACCCTCTGTTGGGAAATTCCTTCTGTTAGCCAACAACAAAGAGATGCTGCCTACAATATTAGTAAGAATGAACTTATGGAGAGAACGAAATATGATGAAGATCAGCAAAGGACCAAGAGGAAACAGAAAGAAGATTGTCCCTACATTGATTTGGAGGAAACTATCGAGAATTACGAAACATATGCTGCAAGCAATATTGTTAAGGATAAAGCTTCAGAAAGAATGAACATTGATGAAGATCGGCAAAGGCCTAAGAGGAAACAGAGAGATGGTCTTTACATTGACTTGGAGGCAGCTGTTGAAAATCAAGGAATAGATGCTGCAATCAATATAACTAAGGATAAACTTTCAGAGAAGATGGAAGATGATGAAGATCAGCAACGGCTTAAGAGGAAAGCAAAAGATCGTCACTATATTGACTTGGAGGCTCCTCTACAGGAAGACATGTCTGCAGAAGAGGTTGAGCACCAGCTACCCAATGATAAAGAAGTTCATCATGTTGATCTATCAGTAGTTGGCTGTCCAAAAATGCTTTGGAATGAGGTAAATGGGAAATTAGAAGATGGAGAAGGTTCCCGAAAGAAGTTAAGGACAAGTTTTGGCGGGACTTCTGGACTTTATAGTTCTGGAGGAAGAGACTCCTTTAATGACAGTTTGACATCTCTTGGAAATGATCTTGGTTCTTGTTCTTCCGTCGAGGACAAAGGATGTGAAGAAGCTTCCAATGAAAAAATCATCCGCGAGGACTTTGGAACGATGGTAAGAACCTTCTTTCCTGTTGATACTCAGAATACCAATGGCTCACAATTGGGACAGAATACCATGTCATTGAAAGGGATTCATGTCCGCGAGGGCGTGATTCCAAATCTAAATCTTGCTTTAGGGGAAGAAACAGAACTGCCGTTGCCCCCTCCTCCTCCTGCTGCCCCCAAGGGTATGCTGCCGCCTTTCCTAGTTGGGGCCGTAGACAAGAAAAATAACCGTCCAGATAGTTTGGCAGATGGACTAGAAGGCGATGTTGCTGCTGCTTCACTTTCCCTTTCTCTATCATTTCCATCTTCAAACAAGGAAAACACACAAGCTTCTTCAAAAGCAGAGCTTTTACCTGATGGTCACAGTGTGAAACCCCCTTTTCTCCTTTTTGGGAGATACACGGACAAATAA 4656 0.4109 MRLESGTCNVCSAPCSSCMHLNPAEEFSDENGRSGEAGQSSMNEGNVHSLSSRACENLQLDVGETSNMLSINSSHDSLSENAESRQILKNKYQDPKHLEGHDDNTSCISRASNANLVNDNHQRNANRINIPCSSASASQFGAERSGTAPSVDMSCLETPSPKDVDTDHSSPTIQGQHGQSRNDESLSDNPSLMHMERESNSQIPEKMSERSIENCSSSLTKESAPVVVSGEKCTTNKDKLIDDTSNVSLKVCPKSQADPDNDVCDAKVEDSKCSVHYGHHEKAEELIKSPGKQESQSENESDESDVVEHDVKVCDICGDAGREDLLAICCRCTDGAEHTYCMREMLEKLPEGDWFCEECQDAVEAENKRLDAEEKKIIKTTSMSQVSGKRLSDNIEVAPPAAKRQTLESSKGSPKASSPKKLVTLSRESSFKSSDKLKGKSGLLMPLRNLPGGDDTHPTRSSSIGPRGQISKSMLLKSNSSNNLNSKPRVKNVDEIFPPRPKGGSEQTSKNMEPSPRITSRSTLFKSSSLGRSSAIESKVKMLSPKSATTQDLKGSRHLKESGAFDRKYLSRNDRHVASSAVSTPKGDQKLTPRGEAIIKPSAANNRELKINQDGKSNAPSKSMNNISRKSLEPQGSSERTSSSNDEAVQDALPRSRETANQVEKSRESISNRVRPVVPTALKSPFCQKCEEFGHSIECCTAGTLQESGSELSVAASSISKEEVHKDNKLKAAIQAAALLKRQIYRKKEVTSQIDEISTLGTELNCEVTSQDRVLVSNTHKNSISTEETHEQQEGLENSTSDSSKCTSASDLKKLNSSSTDLCTQLGKSGLVDLNALKPLLRDLSKKDVAISNVLSKMLAFPEYEYIWQGVFEVHRNEKSPELYSGVQAHLSSSASPKVLEALTKFNPEVSLNEVSRLSTWPSQFHHGGAREDNIALYFFARDVESYERHYRGLLDHMIQNDLALKGVFDGVELLIFPSNQLPESSQRWNMLFFLWGVFRGRRTNHSGSAKKICIPSLNALPVEENSSTADVTLSEHFLSKGVNEKSISSDKACNALPSFTSIDQYPFTVSRNTDINSQTQLCSQQVSSEKPDGRIDSNASSRVPKSCNHLCQPTKSTGSSLEASVLEDEQCRESKPPEELGTSVSSKMVEAKTDSAISDKQENTLCWEIPSVSQQQRDAAYNISKNELMERTKYDEDQQRTKRKQKEDCPYIDLEETIENYETYAASNIVKDKASERMNIDEDRQRPKRKQRDGLYIDLEAAVENQGIDAAINITKDKLSEKMEDDEDQQRLKRKAKDRHYIDLEAPLQEDMSAEEVEHQLPNDKEVHHVDLSVVGCPKMLWNEVNGKLEDGEGSRKKLRTSFGGTSGLYSSGGRDSFNDSLTSLGNDLGSCSSVEDKGCEEASNEKIIREDFGTMVRTFFPVDTQNTNGSQLGQNTMSLKGIHVREGVIPNLNLALGEETELPLPPPPPAAPKGMLPPFLVGAVDKKNNRPDSLADGLEGDVAAASLSLSLSFPSSNKENTQASSKAELLPDGHSVKPPFLLFGRYTDK 1551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 165 198 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 1512 1530 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 779 811 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 381 672 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 26 50 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 284 299 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 504 535 - -
Vivi2g04135 1551 PANTHER - 311 1024 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 796 811 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 205 221 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 1512 1551 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 284 305 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 406 430 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 606 657 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 1352 1375 - -
Vivi2g04135 1551 SUPERFAMILY FYVE/PHD zinc finger 300 362 IPR011011 -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 455 489 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 140 221 - -
Vivi2g04135 1551 Coils Coil 356 376 - -
Vivi2g04135 1551 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 296 387 IPR013083 -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 553 574 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 1115 1149 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 33 50 - -
Vivi2g04135 1551 MobiDBLite consensus disorder prediction 1361 1375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04135 Vivi-Chr2 154361865 154370937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04135 310 397 C2H2 Transcription Factor Family AT3G01460 28.409 9.44e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04135 - - gmx:100806639 1791.93