Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04131 ATGGGAAGTTTGAATGAAGAAGAAACGAAATGGCCACCATGGTTGCAACCACTTCTTCAAACAAGGTTCTTTGTTCAATGCAAAGTGCATGCAAATTCCAATAAAAGTGAATGCAATATGTATTGCTTGGATTGTATCAATGGAGCTCTTTGTTCAACTTGTCTAGCTTCTCATAAAGAACACAAAATTATTCAGATAAGAAGGTCTTCATACCATGATGTGATAAGAGTATCTGAAATACAAAAAATAGTGGACATAACTGGAGTTCAAACATACATTATAAATAGTGCAAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGACATGGAAAAGGAGTCACCAATACTTGCCAAGTTTGTGAAAGAAGTCTTCTTGATTCATTCACTTTCTGCTCCCTTGGTTGTAAGATAGTTGGAACCTCTAAGAAAATTGGGAAGCAAAAGAAGTTAAGTTTGGAAGATGGTTCAGATGGTGAAGAATCAAATAGTAATGGAAATGACAACAAGAGAAACAACATTCAGAACTTTACACCTTCAACACCACCACCTTATAGAATAGCTAAGAGGAGGAAGGGGGTTCCACATAGAGCTCCAATGGGTGGAAGCTTGTTGTAG 618 0.3706 MGSLNEEETKWPPWLQPLLQTRFFVQCKVHANSNKSECNMYCLDCINGALCSTCLASHKEHKIIQIRRSSYHDVIRVSEIQKIVDITGVQTYIINSAKIVFLNERPQPRHGKGVTNTCQVCERSLLDSFTFCSLGCKIVGTSKKIGKQKKLSLEDGSDGEESNSNGNDNKRNNIQNFTPSTPPPYRIAKRRKGVPHRAPMGGSLL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04131 205 Pfam PLATZ transcription factor 67 138 IPR006734 -
Vivi2g04131 205 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 200 - -
Vivi2g04131 205 MobiDBLite consensus disorder prediction 149 205 - -
Vivi2g04131 205 MobiDBLite consensus disorder prediction 158 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04131 Vivi-Chr2 154348885 154350309 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi2g04131 PLATZ 2.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04131 - - gmx:100796834 343.584