Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04098 ATGGGGGGTGAAGAAGGAAGTTTGAATGAAGAAGAAATGAAATGGCCACCATGGTTGCAACCACTTCTCCAAACAAGGTTCTTTGTTCAATGCAAAGTGCATGCAAATTCCAATAAAAGTGAATGCAATATGTATTGCTTGGATTGTATCAATGGAGCTCTTTGTTCAACTTGTCTAGCTTCTCATAAAGAACACAAAGTTATTCAGATAAGAAGGTCTTCATACCATGATGTGATAAGAGTATCTGAAATACAAAAAATAGTGGACATAACTGGAGTTCAAACATACATTATAAATAGTGCAAAGATTGTATTCTTGAATGAAAGGCCTCAACCTAGGCATGGAAAAGGAGTCACCAATACTTGCCAAGTTTGTGAAAGAAGCCTTCTTGATTCATTCACCTTCTGCTCCCTTGGTTGTAAGATAGTTGGAACCTCTAAGAAAATTGGAAAGCAAAAAAAGTTAAGTGAAGAAGATGGTTCAGATGGTGAAGAATCAAATAGTAATGGAAGTGAGAACAAGAGAAACAACATTCAGAGCTTTACACCTTCAACACCACCACCTTATAGAATAGCTAAGAGGAGGAAGGGGGTTCCACATAGAGCTCCAATGGGTGGAAGCTTGTTGTAG 630 0.3794 MGGEEGSLNEEEMKWPPWLQPLLQTRFFVQCKVHANSNKSECNMYCLDCINGALCSTCLASHKEHKVIQIRRSSYHDVIRVSEIQKIVDITGVQTYIINSAKIVFLNERPQPRHGKGVTNTCQVCERSLLDSFTFCSLGCKIVGTSKKIGKQKKLSEEDGSDGEESNSNGSENKRNNIQSFTPSTPPPYRIAKRRKGVPHRAPMGGSLL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04098 209 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 204 - -
Vivi2g04098 209 MobiDBLite consensus disorder prediction 166 186 - -
Vivi2g04098 209 Pfam PLATZ transcription factor 71 142 IPR006734 -
Vivi2g04098 209 MobiDBLite consensus disorder prediction 151 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04098 Vivi-Chr2 154010165 154011667 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi2g04098 PLATZ 2.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04098 - - gmx:100796834 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03273 5 123252198 123254346 Vivi2g04098 2 154010165 154011667 ECH
Vivi2g04098 2 154010165 154011667 Vivi2g04098 2 154010165 154011667 ECH