Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04073 ATGGCGCGTCCTATTGAGTTTGTGAAGGATATCAATGACTCAAAGGACCTCTGGAAGATTTCTGTTAGGTGCAAACATATTTGGTCAGTCACAAGTGCTTCAAAGAAGGAACACATTGAAATGATTCTCGTGGATTCCAACGGATCTATGATTCAAGCTGTTGTACCCCCGTACTTGGTTACCAAGTTCAAGGAATATCTCTCTCATGGTTGTTCATACGTAATGCAGAATTTTAAAGTAGGTTTCAATGACTTCTCTTTTAAGTCCACTGATCATAAACACAAGCTGGTGTTCTGTGGATCTACTTCTGTAAAGAAAACAGAGAACCTAGAAATTCCTGTTAATTTTCTCAATCTTCTTAGTTTGGCTGACATTGTGGATGGAAAGTTCCATTCAAATATTTTAGTTGATGTTCTTGGTGGAGTTGTAGAGATTACTCAATCCCAAGTCAGTTCTGATAACAGCAAGAGCAAAGTTGTTTTTTCAATTACTGATAACAGCAAATCCATTGTTGTGTGTACGTTATGGGGTCAATTTGCAATCCAATTCCATGAGTACTGGACAAATAATAAGGATGATGGGAATATGATTGTGCTTCTGATTAATGCTCGAATAAAGGAGGCTCAAGGAAACTTTCCTTTAAACGTATCAAATGCGTGGAATGGCACAAAACTGTTCATAAATGATATTAGCTTTGATGAAGTTTCCAAACTAAAAGAAAGTTTTAAAGGTGATTTTCCAAAGTTGTCAGATTCAAGTGGGCAAGTTACTGCATCACAAAATTCATACTACTCAGATTTCGATAAGTTTGTATGGAAAGCTGGTATATTAAGTCTTGCAGAAATAGGGATTTTGCAACAGGAAACTACGTGTGTAACTGTTGCGACGCTGGATAAATTTGATGTTGGCCAAGCTGGATGGTATTACGATGGATGTGTTGAATGCACAAAAAGTGTGACTCTGAGGGATGGAAAGCTTGAGTGCTATGCAAAACACATAAGTCCACGTCCCGTGCCCAGGTTTAAACTCGAAATATTGGCTGTTGACGGTAAATGTAAGGTAAAGTTTATTTTTTGGGACGTCGATTGTGTTAAGTTGGTTGGCAAATCCGCTGTTGAGATGATAAATCATCTAAAAAAGGTACATGAGACGGCTTCATCATTCAAGATCCATCATGTTGCAAGAGGTAATGTCCGGACGAAGTGCTTTCTGGATAACTTATGCTGGAAAATGCTGCATGTATAA 1245 0.3807 MARPIEFVKDINDSKDLWKISVRCKHIWSVTSASKKEHIEMILVDSNGSMIQAVVPPYLVTKFKEYLSHGCSYVMQNFKVGFNDFSFKSTDHKHKLVFCGSTSVKKTENLEIPVNFLNLLSLADIVDGKFHSNILVDVLGGVVEITQSQVSSDNSKSKVVFSITDNSKSIVVCTLWGQFAIQFHEYWTNNKDDGNMIVLLINARIKEAQGNFPLNVSNAWNGTKLFINDISFDEVSKLKESFKGDFPKLSDSSGQVTASQNSYYSDFDKFVWKAGILSLAEIGILQQETTCVTVATLDKFDVGQAGWYYDGCVECTKSVTLRDGKLECYAKHISPRPVPRFKLEILAVDGKCKVKFIFWDVDCVKLVGKSAVEMINHLKKVHETASSFKIHHVARGNVRTKCFLDNLCWKMLHV 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04073 414 Gene3D - 3 106 IPR012340 -
Vivi2g04073 414 SUPERFAMILY Nucleic acid-binding proteins 283 379 IPR012340 -
Vivi2g04073 414 CDD RPA1_DBD_B_like 137 233 - -
Vivi2g04073 414 Gene3D - 273 405 IPR012340 -
Vivi2g04073 414 SUPERFAMILY Nucleic acid-binding proteins 7 110 IPR012340 -
Vivi2g04073 414 Gene3D - 110 247 IPR012340 -
Vivi2g04073 414 SUPERFAMILY Nucleic acid-binding proteins 118 249 IPR012340 -
Vivi2g04073 414 CDD RPA1_DBD_A_like 19 104 - -
Vivi2g04073 414 Pfam Domain of unknown function DUF223 40 135 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04073 Vivi-Chr2 153681681 153683621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04073 1 320 Core DNA Replication Machinery Family AT5G08020 22.321 1.50e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04073 - - vvo:131650380 846.269