Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04071 ATGTTGTCCGTCGCTCCTTCTCTTGATGCCAAACAAACCCCAGAACTTGAACAGATAAATCACCAAAAACCTTCGGATTATAATGATAATCCAATTTCCAATCCAACTAATCACATATTTAAATCCAAATTACCTGATATTCCTATCTCTAACAACCTCCCACTTCATACCTACTGCTTCGAGAAACTTCCTGAAACCGCCGATCGTCCTTGCCTCATCGTCGCTTCCAGCGGCAAAATCTATACCTACGCAGAAACTTATCTCCTTTCGAGAAAAATCGCCGCCGGTTTATCCAAACTCGGTGTCCAAAAAGGAGACGTCATCATGATCCTCCTCCAAAACTCAGCTGAATTCGTTCTCTCTTTCATCGCCGCCTCCATGATCGGCGCTGTCGCAACCACCGCTAATCCGTTCTACACCACGGCTGAGATCTTCAAACAAATAACCGCTTCCAAGACGAAGCTTATCATAACACAAGCAATGTACGTTGACAAACTCCGTCCATATGAGGCGAATGATGAGAACGGTGAATTTGACTTTAAGGTAATCACCATCGATGAACCGCCGGTGAACTGTCTACATTTCTCGGTGATTTCCGAAGCGAATGAAGAGGATTTGCCGGAAGTTGAGATCGATTCGGAAGACGCGTTGGCGCTTCCGTTTTCTTCCGGTACAACAGGTTTACCTAAAGGTGTAATTCTAACGCATAAGAGTTTAATAACGAGTGTTGCTCAACAAGTCGACGGAGAGAATCCGAATCTCTATTTAACCACAGAAGATGTTCTTCTTTGCGTTCTTCCGCTGTTTCATATATTTTCTCTCAACAGTGTGCTATTGTGTGCACTGAGAGCAGGGAGTGCGGTTCTGTTAATGCATAAATTCGAGATCGGGACGTTGCTTGGTTTAATACAGGAACATAAAGTCACGGTGGCGATGGTGGTTCCGCCGCTAGTTTTAGCGTTAGCGAAGAATCCCAAGGTTGCGGAATTTGACCTTAGCTCAATACGGTTGGTGCTGTCCGGAGCTGCACCGTTAGGGAAGGAGCTCGAAGAGACTCTCCATAACCGAATTCCTCAAGCCGTTTTGGGACAGGGGTATGGTATGACAGAGGCAGGTCCTGTACTCTCCATGTCTTTAGGCTTTGCAAAGCATCCATTTCCTACAAGATCAGGCTCATGTGGCACTGTTGTAAGAAATGCAGAACTCAAAGTTCTTGACCCTGAAACTGGTCTTTCTCTTGGTTATAATCAACCGGGTGAAATTTGCATCCGAGGCCAACAAATCATGAAAGGATATTTGAATGATGAGAATGCAACAAAAACTACTATTGATGAAGAGGGTTGGCTTCATACTGGTGATGTTGGCTATATAGATGACAATGACGAGATTTTCATAGTTGACAGGGTGAAGGAACTCATCAAATTCAAAGGCTTCCAAGTGCCTCCTGCTGAACTTGAAGGCCTTCTTGTTAGCCATCCATCAATTGCAGACGCAGCTGTTGTTCCGCAAAAAGATGTTGCTGCTGGTGAAGTTCCTGTTGCTTTCGTGGTAAGATCAAATGGAAATGATTTAACTGAAGAGGCTATAAAGGAGTTTATATCTAAACAGGTGGTGTTTTATAAGAGACTACACAAAGTTTATTTCGTCCATGCAATTCCCAAGTCTCCAGCGGGAAAGATATTGAGGAAAGACCTTAGAGCAAAGCTTGAAAACTCCACTTAA 1722 0.4396 MLSVAPSLDAKQTPELEQINHQKPSDYNDNPISNPTNHIFKSKLPDIPISNNLPLHTYCFEKLPETADRPCLIVASSGKIYTYAETYLLSRKIAAGLSKLGVQKGDVIMILLQNSAEFVLSFIAASMIGAVATTANPFYTTAEIFKQITASKTKLIITQAMYVDKLRPYEANDENGEFDFKVITIDEPPVNCLHFSVISEANEEDLPEVEIDSEDALALPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGTLLGLIQEHKVTVAMVVPPLVLALAKNPKVAEFDLSSIRLVLSGAAPLGKELEETLHNRIPQAVLGQGYGMTEAGPVLSMSLGFAKHPFPTRSGSCGTVVRNAELKVLDPETGLSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGNDLTEEAIKEFISKQVVFYKRLHKVYFVHAIPKSPAGKILRKDLRAKLENST 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04071 573 Gene3D - 470 572 IPR045851 -
Vivi2g04071 573 FunFam 4-coumarate--CoA ligase 2 471 572 - -
Vivi2g04071 573 Gene3D - 32 469 IPR042099 -
Vivi2g04071 573 Pfam AMP-binding enzyme 65 475 IPR000873 -
Vivi2g04071 573 Pfam AMP-binding enzyme C-terminal domain 484 559 IPR025110 -
Vivi2g04071 573 MobiDBLite consensus disorder prediction 13 32 - -
Vivi2g04071 573 CDD 4CL 49 565 - -
Vivi2g04071 573 SUPERFAMILY Acetyl-CoA synthetase-like 29 571 - -
Vivi2g04071 573 MobiDBLite consensus disorder prediction 1 32 - -
Vivi2g04071 573 FunFam Long-chain-fatty-acid--CoA ligase FadD 41 470 - -
Vivi2g04071 573 ProSitePatterns Putative AMP-binding domain signature. 219 230 IPR020845 -
Vivi2g04071 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 36 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04071 Vivi-Chr2 153668369 153673134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04071 13 482 Monolignol Biosynthesis Gene Families AT1G65060 68.828 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04071 K01904 - gmx:547492 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04071 2 153668369 153673134 Vivi2g04071 2 153668369 153673134 ECH