Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03975 ATGGTTGCCGCCGCTATCTCAGCCGTCACTCTCACCGATGCTAATCTTCACACCAAATTTCATTCCTCTTCTTCTACACCATTCACCCTCAGTCTTCCACCCTCTCTTCATTTTCGCTTTTCTTCTCACTCCAAACGCTTCTCTTCTATCAGATGCCAATCGGTCAATGGTGAAAAGAGGAAACAAAGTAGTAGAAATGTATTTGACAACGCGAGCAACCTTCTTACAAGCTTGTTAAGTGGTGCGAATTTAGGGTCTATGCCCACAGCTGAAGGTGCTGTTACAGATCTGTTTGACCGGCCACTGTTTTTCTCGCTATATGATTGGTTCTTAGAGCATGGTTCTGTGTATAAACTGGCGTTTGGACCGAAAGCGTTTGTTGTTGTATCAGATCCCATTGTTGCGAGACATATTCTGCGAGAAAATGCATTTTCTTATGATAAGGGAGTACTTGCTGATATCCTAGAACCAATTATGGGAAAAGGACTCATACCTGCAGACCTTGAGACATGGAAGCAAAGGAGAAGAGTGATTGCTCCGGGTTTCCATAACTCATACTTGGAAGCAATGGTACAACTATTCACTTCCTGTTCAGAAAGAACAGTGTTAAAGGTCAATAAGCTTCTTGAAGGAGAGGGGCATGATGGACAGAAGTCAGTGGAATTGGACCTTGAGGCAGAATTTTCAAATTTGGCTCTTGATATTATTGGGCTAGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAATGAATCTCCCGTTATTAAGGCTGTCTATGGCACTCTTTTTGAAGCCGAACATAGATCCACTTTCTATATTCCATATTGGAAATTTCCATTAGCAAGGTGGATTGTGCCCAGGCAAAGGAAATTTCAGGATGACCTTAAAGTCATTAATACTTGTCTCGATGGACTTATCAGAAATGCAAAAGAGAGCAGGCAGGAAACAGATGTTGAAAAACTGCAGCAAAGGGATTACTCAAATTTGAAGGATGCAAGTCTTCTGCGTTTCCTAGTTGATATGCGGGGAGTTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACGACGGCGGCAGTTCTTACATGGGCAGTTTTCCTGCTAGCTCAAAATCCTGACAAAATGAAGAAGGCTCTAGCAGAGGTAGATTCGGTGCTGGGGACGGGGAAGCCAACTTTTGAATTGCTTAAAAAGTTGGAGTACATTAGGTTAATTGTTGTGGAGACTCTTCGATTATATCCACAACCACCTCTGCTGATTAGACGTTCACTCAAACCTGATGTTTTGCCAGGAGGGCATAAAGGTGACAAAGATGGTTATACAATTCCTGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCATCGATCTCCATATTTTTGGGACCGCCCTAATGACTTTGAGCCTGAACGGTTTCTAGTGCAAAACAAGAATGAAGAAGTTGAAGGGTGGGCTGGTTTTGACCCATCTCGAAGCCCTGGAGCTTTGTATCCAAACGAGATTATATCGGATTTTGCGTTCTTGCCTTTTGGTGGTGGACCACGAAAATGCGTTGGAGACCAATTTGCTCTTATGGAATCAACTGTAGCGCTAGCTATGCTGCTACAGAATTTTGACGTGAAACTGAAGGGGACCCCTGAATCGGTAGAACTAGTTACTGGGGCAACTATCCATACCAAAAATGGATTGTGGTGCAATTTGAAGAAGAGATCTAGTTTACATTGA 1755 0.4279 MVAAAISAVTLTDANLHTKFHSSSSTPFTLSLPPSLHFRFSSHSKRFSSIRCQSVNGEKRKQSSRNVFDNASNLLTSLLSGANLGSMPTAEGAVTDLFDRPLFFSLYDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLETWKQRRRVIAPGFHNSYLEAMVQLFTSCSERTVLKVNKLLEGEGHDGQKSVELDLEAEFSNLALDIIGLGVFNYDFGSVTNESPVIKAVYGTLFEAEHRSTFYIPYWKFPLARWIVPRQRKFQDDLKVINTCLDGLIRNAKESRQETDVEKLQQRDYSNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPDKMKKALAEVDSVLGTGKPTFELLKKLEYIRLIVVETLRLYPQPPLLIRRSLKPDVLPGGHKGDKDGYTIPAGTDVFISVYNLHRSPYFWDRPNDFEPERFLVQNKNEEVEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALAMLLQNFDVKLKGTPESVELVTGATIHTKNGLWCNLKKRSSLH 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03975 584 Gene3D Cytochrome P450 89 584 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 Pfam Cytochrome P450 110 574 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 520 529 IPR017972 GO:0005506|GO:0016705
Vivi2g03975 584 PRINTS E-class P450 group I signature 350 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 PRINTS E-class P450 group I signature 527 550 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 PRINTS E-class P450 group I signature 517 527 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 PRINTS E-class P450 group I signature 370 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 SUPERFAMILY Cytochrome P450 97 580 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 CDD CYP97 104 574 - -
Vivi2g03975 584 PANTHER CYTOCHROME P450 FAMILY 4 112 580 - -
Vivi2g03975 584 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 PRINTS P450 superfamily signature 518 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 PRINTS P450 superfamily signature 527 538 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03975 584 PRINTS P450 superfamily signature 361 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03975 Vivi-Chr2 152408895 152416023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03975 41 581 Cytochrome P450 AT4G15110 78.085 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03975 K24543 - gmx:606504 1002.28