Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03973 ATGGAGAACACAACAATGTTAACACCCTCACATGTTTCAGATAGTACATTGATTTGTTATAAACCTAGCATGACAACAACAAATGGTGTATGGCATGGAGATAACCCTTTAGATTATTCTGTCCCTCTCTTCATTTTGCAATTAACCTTAATTGTTCTTACCACACGTTTTTTTGTTTTCATCCTCAAACCTTTTAACCCTCCTCGTGTCATTGCTGAAATCTTGGGTGGATTGTTTTTGGGGCCGTCGGTGCTCGGTCGAAACGAAACCTTTGCAAATATTGTGTTTCCTCTAAAGAGTGCTATGGTTTTAGAAACTTTGGCCAATATAGGTTTGATATACTTTCTGTTTCTAATTGGTTTAGAGATGGATGTGTCGATTGTAAAACACACGGGGAGAAAGGCGGTGTCGCTTGCCATTGCTGGTATGATACTGCCCTCTATTGTTGGTGTTGGAATATCATTTGTTTTGAAGGAAAGAGATGAGAGTGTGAATGAAGTTAGCTATGTTCTCTATCTTGGCATTGTTCTATCGGTTACGTCATTTCCTGTGCTTGCTCGAATACTTACTCAGCTTAAACTCATTAACACGGAGTTAGGAAAGCTTGCTCTTTCGACGTCTCTTGTCAATGATGTGCTTGCTTGGGTTTTACTAGCTCTAGCTATTGCTTTATCGGAGGCGAATTCATCCTCATGGGCTTCTGTTTGGGTTGTACTGGCAAATAGTTTCTTTGTTGGTTTCTGTTTTTTTGTTGTTAGGCCATCTGTGAGTTTGTTGATCAAGAAAACTCCGGAAGGGAAACCGTTTAGCAAGTTCCAAATATGCGTTGTGCTTGTTGGCGTTATGGTTTCGGCTTTCATTACGGATGTTATTGGAACACATTCGATTTTCGGAGCTTTTGTTTATGGATTAGTGATTCCAAATGGTCCACTTGCAGCTGCTATAATTGAGAAGCTAGAAGATTTTGTTTCAGGGCTTTTGCTGCCTCTTTTTTATGCTATTAGTGGACTTAAGACTAACGTTACGTTAGCGAACGGAGGTCGTTTTTGGGCATTTGTATTCGCAATTGTTCCTCTCACTTGTCTTGGAAAGATGGTCGGTACTCTTTTTATTTCAATCCTTTTTGACATACCAACTCGCGATGGCGTTGTTCTTGGTTTTCTTATGAACACCAAAGGTCTTATTGAAATGATTGTTCTCAACATTGGAAGGGAACAAAAGGTGTTAGGTGAGGAAATATTCTCAATTATGATTATTGTAACACTTATAATGACAGCAATAGTTTCGCCTATTGTGACATTAATCTATAAGCCGAGGAAAATACTCATACCTTATCGAAAGAGGACGATACAAAGTTCAAGAGCTGATGCAGAGTTAAGGGTTCTGGTGTGCATTCATTCCCCTAGAAATGTTCCTACAATAATAAATCTTCTAGAGGCCACAAACCCAAACAAAATGTCTCCAATATGTGCTTATGTGCTCCATTTAGTCGAACTCACCGGCCGCGCTTCCGCCATGCTTTTCGTCCATGCCACTACACAGACTGGAGGTCCAGCACTCAACAAAACACAAGCGCAGACCGAACACATCATCACCGCGTTTCGTAACTTCGAGGAACATGTTAGTCACGTCGCTGTCCAACCTTTAACCGCTGTTTCACCTTACTCTACTATGCATGAAGATATATGCATTTCGGCCGAGGAAAAGCGTGTGGCCACCATCATCATTCCTTTTCATAAACAACAAACAGTTGATGGAGAAATGCTAGAAACAAATCCAGCATTGAGAATGGTGAACCATAATTTATTACAAAGTGCTCCTTGTTCGGTCGCAATACTTGTTGATAGAGGCCTTAACGGATCCAACCGGTTAACTTCGTATAAATCTTCTCATAAGGTGGCTGTGTTATTCTTCGGTGGATCGGATGATAGGGAAGCGTTATCCTATGGATGGAGAATGTCAAGGCATCCAAGAGTTAAGCTCACTGTGATGCATTTCATTCAAAGAAAAGACGCAACTCAAACATTTAATGCGGATGATGATCAACTCGACGAACAAAGAAGTTTAAAATCAAACAAACTAGACGAAGAATGTATAAACGATATGAAAATGATTTCTGCAAATGATGACTCAGTGAAATACATAGAAAAAGTTGTGAGTAACGGGGAGGAAACGATTGCGGCGATAAGAGAAATGAACAATGTGAATGATCTGTTAATAGTTGGGAGAGGCCATGGAAGTTCTTCGGCGTTAACCGAAGGTTTGACGGATTGGAGCGAATGTCCTGAGTTAGGAGGCATAGGAGATTTGTTAGCTTCTTCGGATTTCGAAACAACGGCTTCCGTGCTTGTTATGCATCAATATGTTGGACAAGGGCCAGATGGAGAGGATGTTTTTGCACGCGAAAAACCATGGCAATCTAGTGAGAATTTTAATAACATGAGACAACAACATAAGGGAAGATATACAACAAAACTAGTGGGGACAAATACTCAAACATCACAGTTTTTATAA 2514 0.4029 MENTTMLTPSHVSDSTLICYKPSMTTTNGVWHGDNPLDYSVPLFILQLTLIVLTTRFFVFILKPFNPPRVIAEILGGLFLGPSVLGRNETFANIVFPLKSAMVLETLANIGLIYFLFLIGLEMDVSIVKHTGRKAVSLAIAGMILPSIVGVGISFVLKERDESVNEVSYVLYLGIVLSVTSFPVLARILTQLKLINTELGKLALSTSLVNDVLAWVLLALAIALSEANSSSWASVWVVLANSFFVGFCFFVVRPSVSLLIKKTPEGKPFSKFQICVVLVGVMVSAFITDVIGTHSIFGAFVYGLVIPNGPLAAAIIEKLEDFVSGLLLPLFYAISGLKTNVTLANGGRFWAFVFAIVPLTCLGKMVGTLFISILFDIPTRDGVVLGFLMNTKGLIEMIVLNIGREQKVLGEEIFSIMIIVTLIMTAIVSPIVTLIYKPRKILIPYRKRTIQSSRADAELRVLVCIHSPRNVPTIINLLEATNPNKMSPICAYVLHLVELTGRASAMLFVHATTQTGGPALNKTQAQTEHIITAFRNFEEHVSHVAVQPLTAVSPYSTMHEDICISAEEKRVATIIIPFHKQQTVDGEMLETNPALRMVNHNLLQSAPCSVAILVDRGLNGSNRLTSYKSSHKVAVLFFGGSDDREALSYGWRMSRHPRVKLTVMHFIQRKDATQTFNADDDQLDEQRSLKSNKLDEECINDMKMISANDDSVKYIEKVVSNGEETIAAIREMNNVNDLLIVGRGHGSSSALTEGLTDWSECPELGGIGDLLASSDFETTASVLVMHQYVGQGPDGEDVFAREKPWQSSENFNNMRQQHKGRYTTKLVGTNTQTSQFL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03973 837 Gene3D - 487 762 - -
Vivi2g03973 837 PANTHER CATION/H + ANTIPORTER 18 789 - -
Vivi2g03973 837 FunFam Cation/H(+) antiporter 15 43 442 - -
Vivi2g03973 837 Gene3D - 43 440 IPR038770 -
Vivi2g03973 837 Pfam Sodium/hydrogen exchanger family 50 432 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03973 Vivi-Chr2 152388482 152391593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03973 13 809 Antiporter Super Family AT2G13620 60.599 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03973 K26731 - gmx:100800514 1208.36