Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03943 ATGGAGCAGCTCCGGCATATTGGTGAGGTTCTTGGGAGTTTGAAAGCTCTTATGGTTTTACGCGACGATATTCAGATCAATCAACGACAATGTTGTTTGATTCACGACATATTCACTCTAGCGTTTGACACGATCGCGGACGAGATAAGGCAGAATCTTAAGCTTGAAGAAAGGTCTACCAAATGGAAGCCTCTTGAGTTTCCTCTTAGAGAGCTTTGCAGGGTTTTCAAAGAGGGCGAGATATATATTAAGTATTGTTTGGAGTCGAAAGATTGGTGGGGGAAAGCACTCACGCTTTCTCAGAACAGCGACTGCGTCGAGTTTCATATTCATAATTTGCTTTGTTATTTTCCTGCGGTGATCGAAGCGATTGAGAATGCTGGTGAGATGTCGGGTTTGGATCAGGATGAGAATTCGAAGAAGAAACTTATGCTTGCTAGGAAATATGATGTGGAATGGAATGATCCAAAGCTTTTTCAGTGGAGATTCGGGAAACAGTATTTGGTTCCGAAAGAGATTTGCAAACAATTGGAGACTGCTTGGAGAGAAGATAGATGGAGGCTCATAGAATCAATCAAGGACAAAAAATGTTCTTCCAAATTCAATTGTTCGAAGAATGAACAAAATCTCGCAGATATGTTGTTGAAGAAACTAATGAATGGTTCCGAAAAAACAAATAATTGTAACAACAATAATAATAATAACAATAATCAATTATGGCCAATTGGGATTTTGTTAGGAGCCAAGGATTACCAAGTGAGGAGAAGATTAGGAAGAGGAAAAGAATATAAGGAAATTCAATGGTTAGGACAAAGTTTTGCTCTGAGGTATTTTGTTGGCGAGAAAGAAGCTTACCAAAACGAGATTTCGAATTTGATATCGCTTTCTCACCCAAACATATTGCATTATCTATGTGGTTTTTATGATGAAGAGAAGAAAGAGTTTTCTCTTGTGATGGAGTTGATGAACAAGGATTTGTGGACATACATGAAGGAGAATTGTGGTCCTAGGAGACAGATTTTGTTCTCTATACCTGTTGTGGTTGATCTCATGCTTCAAATGGCAAGAGGCATAGAATATCTTCACTCCAAAAAGATTTATCATGGAAACCTCAATCCTAATAGTATCCTACTAAGGGCTAGAAACTCACAAGAAGGTTATTTTCAGGCCAAAGTTGTAGGATTTGGTTTGTCATCTGTGATAAATGGTGACAGCAATGCTGCTAGAACTTCGCCGACGCATAATCCGATTAGTGAAGAGATTAACCCTTTAATTTGGTATGCACCTGAGGTTTTGACTGAGCTAGAACAAACGAAAAATGCTTCCACTTGTAAGTATTCGGAAAAAGCTGATGCGTACAGTTTCGGGATGATATGTTTTGAGTTGTTGACAGGAAAAGTTCCTTTTGATGATAACCATCTTCAAGGAGATAGAACCAATCAGAATATCAAAGCAGGAGAGAGACCTTTGTTTCCACACCGTTCTCCGAAATATCTTGTGAGTTTGATTAAAAAATGTTGGCAAACCGATCCGTCTCAGCGTCCTAGTTTCTCGTCTATTTGTAGGATTCTGCGCTACACGAAGAAGTTTCTGTCAACGAACACTGAGTATGTTATGATCAATCCTGAACAAAACCAGCTCGAACTTCAGAACCCACCTGTGGATTGTTGCGACATTGAAGGAACTTTCCTCAAGACTTTTCCATTGGAGACGGCATGTGATATGTGTCGTGTTGCACAAATACCATATGAAATGTTTGCCTATAAAGTGGTTGAGAAAGGGAAGATCAATAGTCAGAGTCAGAATAATAACATTACTATTAAAGATAAGTGTTGTGAGTGTGAACCAACAAAAGATGAAGTAAATGATGATCAAAGCAAAGTTTATGGAGATATTAGTGCATCCATAATGGAAGATCAAGTAACCAACCCGAAATCGGTATCTGGTGAAACACGATCGATATTTTCTGATAACCCCCCATCAAAGAAGAGTGTTACAATAAAGCTACCAGTACAAATGAAGGCAAAGAAAGACCAAGGAAATTCAAAACTACAAGTATCAAGATCATTACCGCCATTATTGGCTGGTCGCGCTACAAAGACAAATAAGGTGAATCAATCATCATTTGCATCAAGTCCTTTAAGCCCGGGTAGAAGGAGACCTAGCACTTTCTCATCAGAATCTGAGCGTAATTCCAATATCGTCAAAGGGAATCAATCACCATTACCGTCAACTACAAGCTCAGTTAGAAGAAAAAGAAATGAAGGAGGCAATGTCTCAGATTCCAAGTCTTCTAGTTTAAAGCTGAAAACAAGAGATCAATTAACATGTACCAGTTTAAAGACAAAAAAAGCACCTCTTCCTTTGAATCCTTCTCTGAGTCCAACAAGAATGAGAAGAATTAATAGTACTAATAACATGCATGTAAGGATGCAAAAAGGGTTCATCTCAACACCTCCAATGAGTCCTTCGATGAGTCCTTTAAGGACGTGTACAAGCAAAAAATGTGCTCATTTTTCAGATATGGACAGTGGTTTGAAGATACGAGGTAGATCGTCACCATTCGGAATGAGTCCTTTGAGTCCATATATAATAAGAAAAACAGCATGCGGCAATCTCTCTGATTCAGAGAACAGTTTTAATACGAAAAGAGGAAGCTTGTCACCATTTACAATGAGCCCTTTGAGCCCGTACGTAAGAACATCATGCGGTCATGTCTCAGATTAA 2727 0.388 MEQLRHIGEVLGSLKALMVLRDDIQINQRQCCLIHDIFTLAFDTIADEIRQNLKLEERSTKWKPLEFPLRELCRVFKEGEIYIKYCLESKDWWGKALTLSQNSDCVEFHIHNLLCYFPAVIEAIENAGEMSGLDQDENSKKKLMLARKYDVEWNDPKLFQWRFGKQYLVPKEICKQLETAWREDRWRLIESIKDKKCSSKFNCSKNEQNLADMLLKKLMNGSEKTNNCNNNNNNNNNQLWPIGILLGAKDYQVRRRLGRGKEYKEIQWLGQSFALRYFVGEKEAYQNEISNLISLSHPNILHYLCGFYDEEKKEFSLVMELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGIEYLHSKKIYHGNLNPNSILLRARNSQEGYFQAKVVGFGLSSVINGDSNAARTSPTHNPISEEINPLIWYAPEVLTELEQTKNASTCKYSEKADAYSFGMICFELLTGKVPFDDNHLQGDRTNQNIKAGERPLFPHRSPKYLVSLIKKCWQTDPSQRPSFSSICRILRYTKKFLSTNTEYVMINPEQNQLELQNPPVDCCDIEGTFLKTFPLETACDMCRVAQIPYEMFAYKVVEKGKINSQSQNNNITIKDKCCECEPTKDEVNDDQSKVYGDISASIMEDQVTNPKSVSGETRSIFSDNPPSKKSVTIKLPVQMKAKKDQGNSKLQVSRSLPPLLAGRATKTNKVNQSSFASSPLSPGRRRPSTFSSESERNSNIVKGNQSPLPSTTSSVRRKRNEGGNVSDSKSSSLKLKTRDQLTCTSLKTKKAPLPLNPSLSPTRMRRINSTNNMHVRMQKGFISTPPMSPSMSPLRTCTSKKCAHFSDMDSGLKIRGRSSPFGMSPLSPYIIRKTACGNLSDSENSFNTKRGSLSPFTMSPLSPYVRTSCGHVSD 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03943 908 MobiDBLite consensus disorder prediction 641 665 - -
Vivi2g03943 908 MobiDBLite consensus disorder prediction 641 798 - -
Vivi2g03943 908 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 249 525 - -
Vivi2g03943 908 MobiDBLite consensus disorder prediction 699 785 - -
Vivi2g03943 908 FunFam Kinase family protein 248 537 - -
Vivi2g03943 908 SUPERFAMILY Protein kinase-like (PK-like) 249 547 IPR011009 -
Vivi2g03943 908 Pfam Protein of unknown function (DUF1221) 21 223 IPR010632 -
Vivi2g03943 908 Pfam Protein tyrosine and serine/threonine kinase 281 523 IPR001245 GO:0004672|GO:0006468
Vivi2g03943 908 Gene3D Transferase(Phosphotransferase) domain 1 248 551 - -
Vivi2g03943 908 ProSiteProfiles Protein kinase domain profile. 251 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03943 Vivi-Chr2 151757040 151760621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03943 285 541 MAP Kinase Kinase Kinase AT1G14000 31.679 2.24e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Vivi2g03943 PK_Tyr_Ser-Thr 8.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03943 - - psat:127120797 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03943 2 151757040 151760621 Vivi2g03943 2 151757040 151760621 ECH