Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03938 ATGAGTTATTATTATTACTATTATTATTACATTTTTCTGTTTTCACTTTACTTCATTGGTTTGTTAACATGTAATGCAGAACCTGTTGAAGACAAAAAAGCATTGTTAGAGTTTGTTACTAAATTACCACATTCTAAGCCTTTGAATTGGAATTTGAGTTCTTCAGTATGTAGTAATTGGAATGGTGTAACTTGTAGTTTAGATGAGTCTCGAATCGTCGAGATTCGATTACCGGGATTTGGATTTAATGGCACAATTCCTGTTAATACTATTAGTAGAATCAGAGGTTTGCAGAAATTGAGTCTTAGATCTAATTTTATAGGTGGTTATTTTCCAGAAGATTTTGTTAAGTTGAAGAATCTTTCTTTTTTGTATCTTCAGTTTAATGATTTTGTAGGTCCTTTGCCTGATTTTGGTGTTTGGAAGAATTTATCTGTTGTTGATTTGTCTAATAATAGATTCAGTGGTGAAATTCCTGATGTAAAATTGCCTTTGTTGGAACAGTTGAATTTGTCTAACAATGATCTACAGGGTGTTGTTCCTGTTTCACTTGAGAGGTTTCCGAATTCGGCTTTTGTCGGAAACAATGTGTCTCTTGCGAGATGTTCGACGCGTTGTTCTAAATCTGAGAAACATGGGAGGGTTGGTGGAACATTAGTGTTGGGTAGTATTGTTGTTGGTGGTTTTTTATGCCTTGCAGCATTTGTTGTTTTTATGTATGTTTTGTGTTCTAAAAGGAAAGATGGTGATGTTTTTGATGGGAAGTTGGAGAAAGGAGGGAAAATGTCACCTGAAAAAGTGGTCTCTAGAAACCAAGATGCAAACAATAAGCTTTTTTTCTTTGAGGGGTGTAACTATGCTTTTGATTTGGAGGATTTGTTAAGGGCTTCTGCTGAGGTACTTGGTAAGGGAACATTTGGTGCTGCATACAAGGCTGTACTAGAGGACGCAACCACCGTTGTCGTGAAGAGGTTAAAAGAGGTAGCGGTTGGGAAGAAGGATTTTGAGCAACATATGGATGTTGTTGGGAGTCTTAAACATGAGAATGTGGTTGAGCTAAAGGCGTATTACTATTCCAAAGACGAGAAACTTGTTGTATATGACTATTTCAGTCAGGGTAGTATCTCTGCATTGTTGCATGGCAAGAGAGGAGAGGACAAGGTGGCTTTAGATTGGAATACTCGAATCAAAATAGCTTTAGGTGCTGCACGAGGCCTTGCTTGTATTCATTCTGAAAATGGTGGGAAACTTATACACGGCAATATCAAATCGTCGAACATCTTTCTCAATGCCAAACAGTATGGTTGCGTGTCTGATCTTGGCCTGGCAACCATAATGAGCTCAGTCTGCCAGCCTATCTCGCGAGCAGCTGGTTACCGGGCACCAGAAGTTACGGACACTAGAAAAGCAACACAGGCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTAGAGCTTCTAACTGGGAAATCTCCTATTCATACGACCAGAGGCGATGAGATTGTCCACCTTGTGAGATGGGTTCATTCGGTTGTGAGAGAGGAGTGGACGGCTGAAGTATTTGACCTCGAGCTTATGAGATGTCCTAATATAGAAGAAGAGATGGTGGAGATGTTACAGATAGCTATGTCATGCGTTGTAAGGATGCATGATCAAAGACCTACAATGTCAGAAATCGTGAAGATGATGGAAAATGTGAGGCAAATCGATGCAGAGAATCGACCATCATCTGAGAGTCAAGTTGAAAGTGCAACACAGCTTAAATTCTCTCAAGGTGATAGTCCACCTCCTATAAAAGTAGATGAATAA 1809 0.393 MSYYYYYYYYIFLFSLYFIGLLTCNAEPVEDKKALLEFVTKLPHSKPLNWNLSSSVCSNWNGVTCSLDESRIVEIRLPGFGFNGTIPVNTISRIRGLQKLSLRSNFIGGYFPEDFVKLKNLSFLYLQFNDFVGPLPDFGVWKNLSVVDLSNNRFSGEIPDVKLPLLEQLNLSNNDLQGVVPVSLERFPNSAFVGNNVSLARCSTRCSKSEKHGRVGGTLVLGSIVVGGFLCLAAFVVFMYVLCSKRKDGDVFDGKLEKGGKMSPEKVVSRNQDANNKLFFFEGCNYAFDLEDLLRASAEVLGKGTFGAAYKAVLEDATTVVVKRLKEVAVGKKDFEQHMDVVGSLKHENVVELKAYYYSKDEKLVVYDYFSQGSISALLHGKRGEDKVALDWNTRIKIALGAARGLACIHSENGGKLIHGNIKSSNIFLNAKQYGCVSDLGLATIMSSVCQPISRAAGYRAPEVTDTRKATQASDVYSFGVVLLELLTGKSPIHTTRGDEIVHLVRWVHSVVREEWTAEVFDLELMRCPNIEEEMVEMLQIAMSCVVRMHDQRPTMSEIVKMMENVRQIDAENRPSSESQVESATQLKFSQGDSPPPIKVDE 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03938 602 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 370 577 - -
Vivi2g03938 602 ProSiteProfiles Protein kinase domain profile. 295 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03938 602 SUPERFAMILY Protein kinase-like (PK-like) 299 564 IPR011009 -
Vivi2g03938 602 ProSitePatterns Protein kinases ATP-binding region signature. 301 332 IPR017441 GO:0005524
Vivi2g03938 602 Gene3D Transferase(Phosphotransferase) domain 1 370 591 - -
Vivi2g03938 602 Gene3D Ribonuclease Inhibitor 29 206 IPR032675 -
Vivi2g03938 602 FunFam pollen receptor-like kinase 1 264 369 - -
Vivi2g03938 602 PANTHER OS05G0588300 PROTEIN 12 578 - -
Vivi2g03938 602 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Vivi2g03938 602 Gene3D Phosphorylase Kinase; domain 1 259 369 - -
Vivi2g03938 602 MobiDBLite consensus disorder prediction 571 592 - -
Vivi2g03938 602 MobiDBLite consensus disorder prediction 571 602 - -
Vivi2g03938 602 SUPERFAMILY L domain-like 41 190 - -
Vivi2g03938 602 Pfam Protein kinase domain 298 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03938 Vivi-Chr2 151678742 151681326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03938 24 584 Receptor kinase-like Gene Family AT4G23740 58.852 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi2g03938 Pkinase 5.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03938 - - gmx:100814524 823.542