Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03927 ATGGCTATGAAATTGACCGAAGGAGCGATAGCAAGAATTTGCAGCAATGATTCCGTCTACTCTTGTGATCCAGAGTTTCATCCGACGTTGCAAGTAATTGGGGTGGAAAGCCGCTGTGTTATGTTGTCTGATGGTTTGAATTCTAATGTCGGATTGCTCGTCGGTAATCTATTCAATCCAGTCTTTATAGAAAAGTTGCAGAAATGGCCTATTATTATACTCACTCATTACAAGTTGAGCAGATCTATGAACAGGGTTATTTTCATTCTCGAGTGTGATGTTGTACTGGACAATTGTGGTTTAATCGGAGAACCTGTTCCACTACCCAATAATGCTCCTTCGCAATCAGACTTGGACTACTTTATCTCTAAGTTTTCTGATCTTAAGTTGTCTCAGGAGACGAAGCCAGCACTGAGTGAAGGGGTCATAGAAATAATGTGCAATGACAATTTATCTCGTGCCTATGAGTTTAAGCCAATCGTGCTACAAGGCTCCAAAATTTGGTGCGACACCGTTACCTGTCTCTCGGATGGTAAGCATTGTATTCTTGCAGTGTCCCCCACTGATTTGGCAGATGAGTTGATGCATAATTATAATGTTGACATACTCTCTAGTGGTTTCAAAGATAAGTTGCTCCCTACCCCAAATTTGAACCGTACCTCCTTTGTTCTACTCACTAACTATAAGTTGCACGAATGTGATGGTCACAAGTTTATTGTCATCTATAACTTTCGTTACCTTAAGGATGCTAAGGACCATTATCTTGTTTATGTTGACCCAATACACCCTTTTGGTCGTCACTCACATAACCCCGTCCCAAAAATTCCTTCTACATGGAAACCAGTGAATCTATCGCAAGGGGCGATAGAGAAATTGTTCAGTGATAATTTCTCTTCTTATGAAGGGTTTAAGCCTGTGTTGCAAGTTATCTTGACCTGTAACAACTATCTTCTGTTGTCGGATGGTTTTTATATTAACTATGGACACTTATCTAGTAATTTGAGTGAGCTGAGGCTGCACAATTACTCCATTATTAAAATCACCGACTACTCTGTGGATCTAAATACTAAATCACGAAGGATTTTTACAATCCTTTCCCTAGATGTCATACTGCCGGATTGTTGTCCGATCGGAGAACCTACCATCTGCTGTCAGCTAAGCGACATGTTTGAAAGTCCTGACATGATTGAAAGTCCTGCCATGTACCATGTATCCAAGAAAAGCACTTTCTATATATGCTTGAAATAG 1248 0.4022 MAMKLTEGAIARICSNDSVYSCDPEFHPTLQVIGVESRCVMLSDGLNSNVGLLVGNLFNPVFIEKLQKWPIIILTHYKLSRSMNRVIFILECDVVLDNCGLIGEPVPLPNNAPSQSDLDYFISKFSDLKLSQETKPALSEGVIEIMCNDNLSRAYEFKPIVLQGSKIWCDTVTCLSDGKHCILAVSPTDLADELMHNYNVDILSSGFKDKLLPTPNLNRTSFVLLTNYKLHECDGHKFIVIYNFRYLKDAKDHYLVYVDPIHPFGRHSHNPVPKIPSTWKPVNLSQGAIEKLFSDNFSSYEGFKPVLQVILTCNNYLLLSDGFYINYGHLSSNLSELRLHNYSIIKITDYSVDLNTKSRRIFTILSLDVILPDCCPIGEPTICCQLSDMFESPDMIESPAMYHVSKKSTFYICLK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03927 415 Gene3D - 3 109 IPR012340 -
Vivi2g03927 415 Gene3D - 282 383 IPR012340 -
Vivi2g03927 415 SUPERFAMILY Nucleic acid-binding proteins 1 103 IPR012340 -
Vivi2g03927 415 SUPERFAMILY Nucleic acid-binding proteins 282 378 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03927 Vivi-Chr2 151536154 151538757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03927 282 380 Core DNA Replication Machinery Family AT5G45400 31.624 5.87e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03927 - K07466 vvo:131647076 848.966