Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03926 ATGGGCAACCGCAGCAGCAGAAACAAAACCAAACCCTCCTCCGATTCCCAAACCGAATCCCATTCAAAATCAAACCCTCAACATTCCACTCATACTTCCTTCCCACCTCCCAATCGACCAGCCCCAGCCCCAACCCCAACCCCCACTCATCCCTCTCCCGTCGGCCGCGTCTTAGGCCGGCCCATGGAAGACGTCCGATCTACCTACACATTCGGCCGCGAACTAGGCCGCGGCCAATTCGGCGTCACATACCTTGTAACTCACAAAGTCACCAAGGAACAATTCGCCTGCAAATCAATCGCCACGCGCAAGCTCCTCCGCCGCGATGATCTGGACGATATCCGCCGTGAAGTTCAGATCATGCATCACCTCACCGGTCACCGGAACATCGTGGAGCTTAAAGGTGCTTATGAGGATCGCCATTCGGTTAACCTCATCATGGAGCTTTGTGCCGGTGGTGAACTCTTTGATAGGATTATATCTAAAGGACATTACTCCGAACGTGCTGCTTCTGAATTGTGTCGCCAGATGTTGGCCGTTGTTCATAATTGTCACACCATGGGAGTTATGCATAGGGACTTGAAACCCGAGAATTTCTTGTTTCTCAGTAAATCTGAAACTTCGCCTCTTAAAGCCACTGATTTCGGTCTCTCTGTGTTTTTCAAACCCGGAGATGTATTTAAAGATCTTGTTGGGAGTGCGTATTATGTTGCCCCTGAGGTGTTGCGTAGAAATTATGGACCCGAAGCTGATATTTGGAGTGCTGGGGTTATTTTGTATATTCTCCTCTCTGGTGTCCCTCCGTTCTGGGCAGAAAACGAACAGGGTATCTTCGACGCTATTCTTCATGGACATATTGATTTCGAATCGGAACCTTGGCCTAAGATATCAAGTAATGCTAAAGATCTGATCAAGAAGATGTTGCGAGCTGACCCTAAAGAACGACTTTCAGCTGTTGAAGCCCTTAATCATCCTTGGATGAGACATGATGGCGCACCCGATAAGCCTCTCGATATTGCTGTTTTAACCAGAATGAAACAATTCAGGGCAATGAACAAGCTAAAGAAAGTAGCTCTGAAGGTTATTGCTGAAAATCTTTCTGAAGAAGAAATTATTGGCTTGAAGGAAATGTTTAAATCCATGGACACGGATAACAGTGGAACAGTTACTTTTGAAGAGTTGAAAGCTGGTCTCCCCAAACTAGGTACTAAGATATCTGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTTGACGGAAATGGAAGCATTGATTATATTGAATTTATAACAGCTACCATGCACTTGAATAGAATGGATAGAGAGGACCACCTATTCAAAGCTTTTGAACATTTTGACAAGGACAAAAGCGGGTACATTACAAAGGAAGAGTTGGAAACTGCCCTTACAAAGTATAACATGGGGGATGAGAAAACAATAAAGGAGATCATTGACGAAGTTGATTCAGATAATGATGGAAGAATTAACTATGAGGAGTTTGTAGCGATGATGAGGCAAGGCAACCCAGATTTGAACAAACGTCACAAATGA 1554 0.4517 MGNRSSRNKTKPSSDSQTESHSKSNPQHSTHTSFPPPNRPAPAPTPTPTHPSPVGRVLGRPMEDVRSTYTFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLLRRDDLDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIISKGHYSERAASELCRQMLAVVHNCHTMGVMHRDLKPENFLFLSKSETSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILHGHIDFESEPWPKISSNAKDLIKKMLRADPKERLSAVEALNHPWMRHDGAPDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTVTFEELKAGLPKLGTKISESEVRQLMEAADVDGNGSIDYIEFITATMHLNRMDREDHLFKAFEHFDKDKSGYITKEELETALTKYNMGDEKTIKEIIDEVDSDNDGRINYEEFVAMMRQGNPDLNKRHK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03926 517 Pfam Protein kinase domain 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03926 517 SUPERFAMILY Protein kinase-like (PK-like) 66 340 IPR011009 -
Vivi2g03926 517 ProSitePatterns EF-hand calcium-binding domain. 454 466 IPR018247 -
Vivi2g03926 517 SUPERFAMILY EF-hand 365 506 IPR011992 -
Vivi2g03926 517 Gene3D - 334 509 - -
Vivi2g03926 517 FunFam Calcium-dependent protein kinase 1 71 154 - -
Vivi2g03926 517 SMART serkin_6 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03926 517 FunFam calcium-dependent protein kinase 1 155 334 - -
Vivi2g03926 517 CDD STKc_CAMK 69 326 - -
Vivi2g03926 517 FunFam Calcium-dependent protein kinase 1 334 509 - -
Vivi2g03926 517 Pfam EF-hand domain pair 374 434 IPR002048 GO:0005509
Vivi2g03926 517 Pfam EF-hand domain pair 444 506 IPR002048 GO:0005509
Vivi2g03926 517 MobiDBLite consensus disorder prediction 1 61 - -
Vivi2g03926 517 SMART efh_1 480 508 IPR002048 GO:0005509
Vivi2g03926 517 SMART efh_1 409 437 IPR002048 GO:0005509
Vivi2g03926 517 SMART efh_1 373 401 IPR002048 GO:0005509
Vivi2g03926 517 SMART efh_1 445 473 IPR002048 GO:0005509
Vivi2g03926 517 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Vivi2g03926 517 CDD EFh 445 506 IPR002048 GO:0005509
Vivi2g03926 517 ProSiteProfiles EF-hand calcium-binding domain profile. 477 511 IPR002048 GO:0005509
Vivi2g03926 517 ProSiteProfiles EF-hand calcium-binding domain profile. 405 440 IPR002048 GO:0005509
Vivi2g03926 517 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Vivi2g03926 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Vivi2g03926 517 ProSiteProfiles Protein kinase domain profile. 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03926 517 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Vivi2g03926 517 Gene3D Transferase(Phosphotransferase) domain 1 155 333 - -
Vivi2g03926 517 MobiDBLite consensus disorder prediction 33 51 - -
Vivi2g03926 517 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
Vivi2g03926 517 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Vivi2g03926 517 ProSitePatterns EF-hand calcium-binding domain. 418 430 IPR018247 -
Vivi2g03926 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 58 501 - -
Vivi2g03926 517 MobiDBLite consensus disorder prediction 1 32 - -
Vivi2g03926 517 Gene3D Phosphorylase Kinase; domain 1 71 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03926 Vivi-Chr2 151478801 151483770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03926 55 515 EF-hand Containing Proteins AT4G23650 79.741 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi2g03926 Pkinase 5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03926 K13412 - gmx:100808536 845.499