Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03925 ATGGAACAGAAAGGTTTGTTGTTATCAGCGCTTAGCGTTGGTGTTGGAGTTGGAGTCGGCCTTGGTTTGGCTTCCGGACAAACCAAATGGGGAGCTAATGCTTTCGCCTCGAACGCCATCACACCGGAGAAAATGGAACACGAAATGCTTCGACTTGTTGTTGATGGCAGAGAAAGCAATGTCACTTTTGACAATTTCCCTTACTATCTCAGTGAGAAGACACGGGTGTTGCTGACAAGTGCTGCCTATGTCCATTTAAAGCATGCAGAGGTTTCTAAATATACACGGAATCTCGCTCCGGCAAGCCGGACTATTCTGCTCTCAGGGCCAGCCGAGCTTTACCAACAGGTGCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCCAAGTTGCTTCTGTTTGATGTAACTGACTTTTCTTTGAAGATTCAAAGTAGATATGGCTCTTCCAACAATGAAACTTCTTTCAAAAGATCTACTTCAGACACGACTTTGGCTCGGTTATCTGACCTATTTGGTTCATTTTCAATCTTTCCACCAAGAGAAGAGAATAAAGTTGCAGGCAGAATACACAAGAGAAGCAGTGGCACAGACCTTAAACGAATGGAGGCTGAAGAATCTTATACTCCGACTAAGCTTCGTAGGAATGCATCAGCCTCTGCAAATATTAGCAGCCTTGGTTCGCAAAGCAATCCTACAAACTCAGCACCTGGGAAGCACATGGCCAATTGGTCTTTTGATGAAAGGCTTCTTATACAGACTCTTTACAAGGCTCTAGTTTTTGTGTCAAAAACCTATCCCATTGTTCTGTATCTGCGGGATGTTGATAAGCTGTTGTGTAGATCACAGAGGATATGTAAATTATTCCAGTCAATGTTAAACAAATTATCCGGGCCGATTTTGATTCTTGGTTCAAGGGTTTTGGATTCTGGTAATGAATGCAAAGAAGTGGATGAGATGATTAGCCCCCTCTTCCCTTACAACATAGAAATCAGCCCACCAGAAGATGAGTCTCGTCTTGTCAGCTGGAAGTCTCAATTTGAAGCGGATATGAAGAGGATACAGATTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTCATGACCTGGACTCCATCTGTGTGGCAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTGTTGTGTCAGCAATTTCTTATCATTTAATGAATAACAAAGAGCCTGAATACAGAAATGGGAAACTGGTTATTCCATGCAATAGCTTATCCCATGCTCTGGGTATATTCCACGAGGGAAAACTCAGTGGAAGAGATACAATAAAACTAGAAGCTCAAGCAGTAACATCTGAGAGAGAGGAAGGAACTGTTACGAAACCAGAAGAAAAGTCTGAAAATCCTGCTCCTGGTATAAAGACTGAAAATCCTGCTCCTGGTATAAAGACTGAAACAGAAATACTAACTTCGGTGGGCAAAACTGATGGTGAAAATTCAGTTCCTGCAACCAAAGCTGAAGTTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCTGAAGTGATACCAGCAAATGAAATTGGGGTAACATTCTCCGATATTGGTGCCTTAGAGGAGACTAAAGAGTCACTTCAAGAACTAGTAATGCTTCCCCTTCGAAGGCCAGACCTTTTTGATGGAGGCCTTTTAAAGCCTTGTAGAGGAATATTACTATTTGGGCCGCCTGGAACAGGAAAAACAATGCTGGCAAAGGCCATTGCAAACGAGGCTGGAGCAAGTTTCATTAATGTATCCATGTCTACCATCACCTCTAAATGGTTTGGTGAAGACGAGAAGAATGTCCGTGCTTTATTCACACTGGCAGCCAAGGTCTCTCCAACTATTATATTTGTTGATGAGGTGGATAGTATGCTTGGGCAGCGGACAAGAGTCGGGGAACATGAAGCCATGCGGAAAATAAAGAATGAATTTATGACCAATTGGGATGGACTTACCTCAAAACCATCGGATCGCATCCTTGTCCTTGCTGCAACCAATAGGCCCTTTGACTTGGATGAAGCAATTATTAGACGATTTGAAAGGAGGATTATGGTTGCATTACCCTCTGTGGAGAACAGGGAAAATATATTGAGGACGCTTTTGGCTAAAGAGAAGGTGGACAATGGACTTGATTTTAAGGAAATCGCAACTATGACAGAAGGATACAGCGGAAGCGATCTAAAGAACTTATGCACAACTGCTGCTTATAGACCTGTTAGAGAGTTAATTCAGCAAGAGTTAAAGAAGGATTCGGAAAAAAAGAAGAAAGATGCCGAAGGAAAAAATAGCCATGATGTTCATGATGCAGAGGAGGAAGTTAAACAGGAAAGAGTTATTACCCTTAGGCCTTTGAATATGGAGGACTTCAGAGTGGCAAAGAATCAGGTTGCCGCAAGCTTTGCAGCTGAAGGGGCTGGAATGAATGACTTGAAGCAGTGGAATGACCTTTATGGAGAAGGTGGTTCAAGGAAGAAAGAGCAATTATCTTATTTCCTATGA 2532 0.4246 MEQKGLLLSALSVGVGVGVGLGLASGQTKWGANAFASNAITPEKMEHEMLRLVVDGRESNVTFDNFPYYLSEKTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLFDVTDFSLKIQSRYGSSNNETSFKRSTSDTTLARLSDLFGSFSIFPPREENKVAGRIHKRSSGTDLKRMEAEESYTPTKLRRNASASANISSLGSQSNPTNSAPGKHMANWSFDERLLIQTLYKALVFVSKTYPIVLYLRDVDKLLCRSQRICKLFQSMLNKLSGPILILGSRVLDSGNECKEVDEMISPLFPYNIEISPPEDESRLVSWKSQFEADMKRIQIQDNKNHIMEVLAANDLDCHDLDSICVADTMVLSNYIEEIVVSAISYHLMNNKEPEYRNGKLVIPCNSLSHALGIFHEGKLSGRDTIKLEAQAVTSEREEGTVTKPEEKSENPAPGIKTENPAPGIKTETEILTSVGKTDGENSVPATKAEVPDNEFEKRIRPEVIPANEIGVTFSDIGALEETKESLQELVMLPLRRPDLFDGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTNWDGLTSKPSDRILVLAATNRPFDLDEAIIRRFERRIMVALPSVENRENILRTLLAKEKVDNGLDFKEIATMTEGYSGSDLKNLCTTAAYRPVRELIQQELKKDSEKKKKDAEGKNSHDVHDAEEEVKQERVITLRPLNMEDFRVAKNQVAASFAAEGAGMNDLKQWNDLYGEGGSRKKEQLSYFL 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03925 843 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 842 - -
Vivi2g03925 843 Gene3D - 526 786 IPR027417 -
Vivi2g03925 843 Pfam ATPase family associated with various cellular activities (AAA) 567 696 IPR003959 GO:0005524|GO:0016887
Vivi2g03925 843 MobiDBLite consensus disorder prediction 759 785 - -
Vivi2g03925 843 Pfam AAA+ lid domain 721 760 IPR041569 -
Vivi2g03925 843 MobiDBLite consensus disorder prediction 185 209 - -
Vivi2g03925 843 Gene3D - 699 782 - -
Vivi2g03925 843 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 526 701 - -
Vivi2g03925 843 SMART AAA_5 563 700 IPR003593 GO:0016887
Vivi2g03925 843 MobiDBLite consensus disorder prediction 185 210 - -
Vivi2g03925 843 ProSitePatterns AAA-protein family signature. 670 689 IPR003960 GO:0005524|GO:0016887
Vivi2g03925 843 MobiDBLite consensus disorder prediction 448 468 - -
Vivi2g03925 843 MobiDBLite consensus disorder prediction 448 478 - -
Vivi2g03925 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 527 764 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03925 Vivi-Chr2 151466090 151472320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03925 527 757 Calmodulin-binding Proteins AT3G56690 37.179 3.13e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03925 - - gmx:100808011 1291.56