Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03924 ATGGAACAGAAAGGTTTGTTGTTATCAGCGCTTAGCGTTGGTGTTGGAGTTGGAGTCGGCCTTGGTTTGGCTTCCGGACAAACCAAATGGGGAGCTAATGCTTTCGCCTCGAACGCCATCACACCGGAGAAAATGGAACACGAAATGCTTCGACTTGTTGTTGATGGCAGAGAAAGCAATGTCACTTTTGACAATTTCCCTTACTATCTCAGTGAGAAGACACGGGTGTTGCTGACAAGTGCTGCCTATGTCCATTTAAAGCATGCAGAGGTTTCTAAATATACACGGAATCTCGCTCCGGCAAGCCGGACTATTCTGCTCTCAGGGCCAGCCGAGCTTTACCAACAGGTGCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCCAAGTTGCTTCTGTTTGATGTAACTGACTTTTCTTTGAAGATTCAAAGTAGATATGGCTCTTCCAACAATGAAACTTCTTTCAAAAGATCTACTTCAGACACGACTTTGGCTCGGTTATCTGACCTATTTGGTTCATTTTCAATCTTTCCACCAAGAGAAGAGAATAAAGTTGCAGGCAGAATACACAAGAGAAGCAGTGGCACAGACCTTAAACGAATGGAGGCTGAAGAATCTTATACTCCGACTAAGCTTCGTAGGAATGCATCAGCCTCTGCAAATATTAGCAGCCTTGGTTCGCAAAGCAATCCTACAAACTCAGCACCTGGGAAGCACATGGCCAATTGGTCTTTTGATGAAAGGCTTCTTATACAGACTCTTTACAAGGCTCTAGTTTTTGTGTCAAAAACCTATCCCATTGTTCTGTATCTGCGGGATGTTGATAAGCTGTTGTGTAGATCACAGAGGATATGTAAATTATTCCAGTCAATGTTAAACAAATTATCCGGGCCGATTTTGATTCTTGGTTCAAGGGTTTTGGATTCTGGTAATGAATGCAAAGAAGTGGATGAGATGATTAGCCCCCTCTTCCCTTACAACATAGAAATCAGCCCACCAGAAGATGAGTCTCGTCTTGTCAGCTGGAAGTCTCAATTTGAAGCGGATATGAAGAGGATACAGATTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTCATGACCTGGACTCCATCTGTGTGGCAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTGTTGTGTCAGCAATTTCTTATCATTTAATGAATAACAAAGAGCCTGAATACAGAAATGGGAAACTGGTTATTCCATGCAATAGCTTATCCCATGCTCTGGGTATATTCCACGAGGGAAAACTCAGTGGAAGAGATACAATAAAACTAGAAGCTCAAGCAGTAACATCTGAGCAGAGAGAGGAAGGAACTGTTACGAAACCAGAAGAAAAGTCTGAAAATCCTGCTCCTGGTATAAAGACTGAAAATCCTGCTCCTGGTATAAAGACTGAAACAGAAATACTAACTTCGGTGGGCAAAACTGATGGTGAAAATTCAGTTCCTGCAACCAAAGCTGAAGTTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCTGAAGTGATACCAGCAAATGAAATTGGGGTAACATTCTCCGATATTGGTGCCTTAGAGGAGACTAAAGAGTCACTTCAAGAACTAGTAATGCTTCCCCTTCGAAGGCCAGACCTTTTTGATGGAGGCCTTTTAAAGCCTTGTAGAGGAATATTACTATTTGGGCCGCCTGGAACAGGAAAAACAATGCTGGCAAAGGCCATTGCAAACGAGGCTGGAGCAAGTTTCATTAATGTATCCATGTCTACCATCACCTCTAAATGGTTTGGTGAAGACGAGAAGAATGTCCGTGCTTTATTCACACTGGCAGCCAAGGTCTCTCCAACTATTATATTTGTTGATGAGGTGGATAGTATGCTTGGGCAGCGGACAAGAGTCGGGGAACATGAAGCCATGCGGAAAATAAAGAATGAATTTATGACCAATTGGGATGGACTTACCTCAAAACCATCGGATCGCATCCTTGTCCTTGCTGCAACCAATAGGCCCTTTGACTTGGATGAAGCAATTATTAGACGATTTGAAAGGAGGATTATGGTTGCATTACCCTCTGTGGAGAACAGGGAAAATATATTGAGGACGCTTTTGGCTAAAGAGAAGGTGGACAATGGACTTGATTTTAAGGAAATCGCAACTATGACAGAAGGATACAGCGGAAGCGATCTAAAGAACTTATGCACAACTGCTGCTTATAGACCTGTTAGAGAGTTAATTCAGCAAGAGTTAAAGAAGGATTCGGAAAAAAAGAAGAAAGATGCCGAAGGAAAAAATAGCCATGATGTTCATGATGCAGAGGAGGAAGTTAAACAGGAAAGAGTTATTACCCTTAGGCCTTTGAATATGGAGGACTTCAGAGTGGCAAAGAATCAGGTTGCCGCAAGCTTTGCAGCTGAAGGGGCTGGAATGAATGACTTGAAGCAGTGGAATGACCTTTATGGAGAAGGTGGTTCAAGGAAGAAAGAGCAATTATCTTATTTCCTATGA 2535 0.4249 MEQKGLLLSALSVGVGVGVGLGLASGQTKWGANAFASNAITPEKMEHEMLRLVVDGRESNVTFDNFPYYLSEKTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLFDVTDFSLKIQSRYGSSNNETSFKRSTSDTTLARLSDLFGSFSIFPPREENKVAGRIHKRSSGTDLKRMEAEESYTPTKLRRNASASANISSLGSQSNPTNSAPGKHMANWSFDERLLIQTLYKALVFVSKTYPIVLYLRDVDKLLCRSQRICKLFQSMLNKLSGPILILGSRVLDSGNECKEVDEMISPLFPYNIEISPPEDESRLVSWKSQFEADMKRIQIQDNKNHIMEVLAANDLDCHDLDSICVADTMVLSNYIEEIVVSAISYHLMNNKEPEYRNGKLVIPCNSLSHALGIFHEGKLSGRDTIKLEAQAVTSEQREEGTVTKPEEKSENPAPGIKTENPAPGIKTETEILTSVGKTDGENSVPATKAEVPDNEFEKRIRPEVIPANEIGVTFSDIGALEETKESLQELVMLPLRRPDLFDGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTNWDGLTSKPSDRILVLAATNRPFDLDEAIIRRFERRIMVALPSVENRENILRTLLAKEKVDNGLDFKEIATMTEGYSGSDLKNLCTTAAYRPVRELIQQELKKDSEKKKKDAEGKNSHDVHDAEEEVKQERVITLRPLNMEDFRVAKNQVAASFAAEGAGMNDLKQWNDLYGEGGSRKKEQLSYFL 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03924 844 Gene3D - 527 787 IPR027417 -
Vivi2g03924 844 Pfam ATPase family associated with various cellular activities (AAA) 568 697 IPR003959 GO:0005524|GO:0016887
Vivi2g03924 844 MobiDBLite consensus disorder prediction 455 469 - -
Vivi2g03924 844 MobiDBLite consensus disorder prediction 449 479 - -
Vivi2g03924 844 SMART AAA_5 564 701 IPR003593 GO:0016887
Vivi2g03924 844 Gene3D - 700 783 - -
Vivi2g03924 844 MobiDBLite consensus disorder prediction 185 209 - -
Vivi2g03924 844 MobiDBLite consensus disorder prediction 185 210 - -
Vivi2g03924 844 MobiDBLite consensus disorder prediction 760 786 - -
Vivi2g03924 844 Pfam AAA+ lid domain 722 761 IPR041569 -
Vivi2g03924 844 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 527 702 - -
Vivi2g03924 844 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 843 - -
Vivi2g03924 844 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 528 765 IPR027417 -
Vivi2g03924 844 ProSitePatterns AAA-protein family signature. 671 690 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03924 Vivi-Chr2 151466090 151472322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03924 528 758 Calmodulin-binding Proteins AT3G56690 37.179 2.86e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03924 - - gmx:100808011 1288.09