Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03923 ATGGAACAGAAAGGTTTGTTGTTATCAGCGCTTAGCGTTGGTGTTGGAGTTGGAGTCGGCCTTGGTTTGGCTTCCGGACAAACCAAATGGGGAGCTAATGCTTTCGCCTCGAACGCCATCACACCGGAGAAAATGGAACACGAAATGCTTCGACTTGTTGTTGATGGCAGAGAAAGCAATGTCACTTTTGACAATTTCCCTTACTATCTCAGTGAGAAGACACGGGTGTTGCTGACAAGTGCTGCCTATGTCCATTTAAAGCATGCAGAGGTTTCTAAATATACACGGAATCTCGCTCCGGCAAGCCGGACTATTCTGCTCTCAGGGCCAGCCGAGCTTTACCAACAGGTGCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCCAAGTTGCTTCTGTTTGATGTAACTGACTTTTCTTTGAAGATTCAAAGTAGATATGGCTCTTCCAACAATGAAACTTCTTTCAAAAGATCTACTTCAGACACGACTTTGGCTCGGTTATCTGACCTATTTGGTTCATTTTCAATCTTTCCACCAAGAGAAGAGAATAAAGGCAGAATACACAAGAGAAGCAGTGGCACAGACCTTAAACGAATGGAGGCTGAAGAATCTTATACTCCGACTAAGCTTCGTAGGAATGCATCAGCCTCTGCAAATATTAGCAGCCTTGGTTCGCAAAGCAATCCTACAAACTCAGCACCTGGGAAGCACATGGCCAATTGGTCTTTTGATGAAAGGCTTCTTATACAGACTCTTTACAAGGCTCTAGTTTTTGTGTCAAAAACCTATCCCATTGTTCTGTATCTGCGGGATGTTGATAAGCTGTTGTGTAGATCACAGAGGATATGTAAATTATTCCAGTCAATGTTAAACAAATTATCCGGGCCGATTTTGATTCTTGGTTCAAGGGTTTTGGATTCTGGTAATGAATGCAAAGAAGTGGATGAGATGATTAGCCCCCTCTTCCCTTACAACATAGAAATCAGCCCACCAGAAGATGAGTCTCGTCTTGTCAGCTGGAAGTCTCAATTTGAAGCGGATATGAAGAGGATACAGATTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTCATGACCTGGACTCCATCTGTGTGGCAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTGTTGTGTCAGCAATTTCTTATCATTTAATGAATAACAAAGAGCCTGAATACAGAAATGGGAAACTGGTTATTCCATGCAATAGCTTATCCCATGCTCTGGGTATATTCCACGAGGGAAAACTCAGTGGAAGAGATACAATAAAACTAGAAGCTCAAGCAGTAACATCTGAGCAGAGAGAGGAAGGAACTGTTACGAAACCAGAAGAAAAGTCTGAAAATCCTGCTCCTGGTATAAAGACTGAAAATCCTGCTCCTGGTATAAAGACTGAAACAGAAATACTAACTTCGGTGGGCAAAACTGATGGTGAAAATTCAGTTCCTGCAACCAAAGCTGAAGTTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCTGAAGTGATACCAGCAAATGAAATTGGGGTAACATTCTCCGATATTGGTGCCTTAGAGGAGACTAAAGAGTCACTTCAAGAACTAGTAATGCTTCCCCTTCGAAGGCCAGACCTTTTTGATGGAGGCCTTTTAAAGCCTTGTAGAGGAATATTACTATTTGGGCCGCCTGGAACAGGAAAAACAATGCTGGCAAAGGCCATTGCAAACGAGGCTGGAGCAAGTTTCATTAATGTATCCATGTCTACCATCACCTCTAAATGGTTTGGTGAAGACGAGAAGAATGTCCGTGCTTTATTCACACTGGCAGCCAAGGTCTCTCCAACTATTATATTTGTTGATGAGGTGGATAGTATGCTTGGGCAGCGGACAAGAGTCGGGGAACATGAAGCCATGCGGAAAATAAAGAATGAATTTATGACCAATTGGGATGGACTTACCTCAAAACCATCGGATCGCATCCTTGTCCTTGCTGCAACCAATAGGCCCTTTGACTTGGATGAAGCAATTATTAGACGATTTGAAAGGAGGATTATGGTTGCATTACCCTCTGTGGAGAACAGGGAAAATATATTGAGGACGCTTTTGGCTAAAGAGAAGGTGGACAATGGACTTGATTTTAAGGAAATCGCAACTATGACAGAAGGATACAGCGGAAGCGATCTAAAGAACTTATGCACAACTGCTGCTTATAGACCTGTTAGAGAGTTAATTCAGCAAGAGTTAAAGAAGGATTCGGAAAAAAAGAAGAAAGATGCCGAAGGAAAAAATAGCCATGATGTTCATGATGCAGAGGAGGAAGTTAAACAGGAAAGAGTTATTACCCTTAGGCCTTTGAATATGGAGGACTTCAGAGTGGCAAAGAATCAGGTTGCCGCAAGCTTTGCAGCTGAAGGGGCTGGAATGAATGACTTGAAGCAGTGGAATGACCTTTATGGAGAAGGTGGTTCAAGGAAGAAAGAGCAATTATCTTATTTCCTATGA 2529 0.4247 MEQKGLLLSALSVGVGVGVGLGLASGQTKWGANAFASNAITPEKMEHEMLRLVVDGRESNVTFDNFPYYLSEKTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLFDVTDFSLKIQSRYGSSNNETSFKRSTSDTTLARLSDLFGSFSIFPPREENKGRIHKRSSGTDLKRMEAEESYTPTKLRRNASASANISSLGSQSNPTNSAPGKHMANWSFDERLLIQTLYKALVFVSKTYPIVLYLRDVDKLLCRSQRICKLFQSMLNKLSGPILILGSRVLDSGNECKEVDEMISPLFPYNIEISPPEDESRLVSWKSQFEADMKRIQIQDNKNHIMEVLAANDLDCHDLDSICVADTMVLSNYIEEIVVSAISYHLMNNKEPEYRNGKLVIPCNSLSHALGIFHEGKLSGRDTIKLEAQAVTSEQREEGTVTKPEEKSENPAPGIKTENPAPGIKTETEILTSVGKTDGENSVPATKAEVPDNEFEKRIRPEVIPANEIGVTFSDIGALEETKESLQELVMLPLRRPDLFDGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTNWDGLTSKPSDRILVLAATNRPFDLDEAIIRRFERRIMVALPSVENRENILRTLLAKEKVDNGLDFKEIATMTEGYSGSDLKNLCTTAAYRPVRELIQQELKKDSEKKKKDAEGKNSHDVHDAEEEVKQERVITLRPLNMEDFRVAKNQVAASFAAEGAGMNDLKQWNDLYGEGGSRKKEQLSYFL 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03923 842 Pfam ATPase family associated with various cellular activities (AAA) 566 695 IPR003959 GO:0005524|GO:0016887
Vivi2g03923 842 MobiDBLite consensus disorder prediction 758 784 - -
Vivi2g03923 842 Gene3D - 525 785 IPR027417 -
Vivi2g03923 842 SMART AAA_5 562 699 IPR003593 GO:0016887
Vivi2g03923 842 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 525 700 - -
Vivi2g03923 842 MobiDBLite consensus disorder prediction 184 207 - -
Vivi2g03923 842 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 841 - -
Vivi2g03923 842 MobiDBLite consensus disorder prediction 453 467 - -
Vivi2g03923 842 MobiDBLite consensus disorder prediction 447 477 - -
Vivi2g03923 842 ProSitePatterns AAA-protein family signature. 669 688 IPR003960 GO:0005524|GO:0016887
Vivi2g03923 842 Gene3D - 698 781 - -
Vivi2g03923 842 MobiDBLite consensus disorder prediction 184 208 - -
Vivi2g03923 842 Pfam AAA+ lid domain 720 759 IPR041569 -
Vivi2g03923 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 526 763 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03923 Vivi-Chr2 151466090 151472322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03923 526 756 Calmodulin-binding Proteins AT3G56690 37.179 2.88e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03923 - - gmx:100808011 1293.1