Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03906 ATGATCATATCCGAGAAAAACCGTAGAGAGATCTCCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGATTTCAATTTGGCGAAGCACCCAGAGATTGATGTTCCAAATCTGCAAGTGATTAAGCTGATGCAGAGCTTCAAATCTAAGGAATATGTGAGGGAGACTTTTGCTTGGATGCATTATTACTGGTTTTTGACTAATGATGGAATTGAGTTCCTCAGGACTTATCTCAATCTTCCATCTGAGATTGTGCCTGCTACTTTGAAGAAGCAGGCTAAGCCAGCTGGTAGACCATTCGGTGGTCCTCCTGGTGATCGCCCTAGAGGTCCACCTCGATTTGAGGGAGAGAGGAGATTCGGTGGTGACCGTGATGGGTACCGTGGTGGTCCAGGTCGTGGTGAGTTTGGTGGAGACAAGGGTGGAGCTCCAGCTGACTACAGACCTTCTTTCGGGGGTCCTGGTGGAAGACCTGGCTTTGGTCGCGGTTCTGGTGGCTTTGGAGCACCAACCAGTTCTAATGATGCTTAG 537 0.4842 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPGRGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03906 178 Gene3D - 1 104 IPR036388 -
Vivi2g03906 178 PANTHER 40S RIBOSOMAL PROTEIN S10 1 171 IPR037447 -
Vivi2g03906 178 Pfam Plectin/S10 domain 3 94 IPR005326 -
Vivi2g03906 178 MobiDBLite consensus disorder prediction 91 178 - -
Vivi2g03906 178 MobiDBLite consensus disorder prediction 112 132 - -
Vivi2g03906 178 FunFam 40S ribosomal protein S10 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03906 Vivi-Chr2 151109123 151110990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03906 1 153 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.117 1.01e-73 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03906 K02947 - gmx:100500445 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03906 2 151109123 151110990 Vivi2g03906 2 151109123 151110990 ECH
Vivi2g03906 2 151109123 151110990 Vivi5g05958 5 163867011 163869102 PCT