Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03901 ATGGTATATGTAAAAGAAGCCATCAATTGTTGTTCATTGAATTTGTTATATCAACAAGAAGCTGCAACCATGTTGGTTGAACTTGCACTTGCTTTATTAGTGATAGCTTTCTTTATACACTTGCGTCCAACACCCACTGCTAAATCAAAGTCACTTCGCCATCTTCCTAATCCACCAAGTCCCAAACCTCGTCTTCCTTTCATTGGTCATCTTCATCTTTTAGATAATCCTCTTCTTCATCACTGTCTCATCCGTCTAGGACAAATTTATGGCCCTTTATACTCTCTTTACTTTGGCTCCATGCCCACCATTGTTGTATCAACTCCCGATCTCTTCAAACTCTTCTTTCAAACTCATGAAGCCACTTCCTTCAACGCAAGGTTCCAAACCTCCGCTGTCAGACGGTTAAGTTATGGTAGCTCCGTTGCTATGGTTCCCTTTGGACCTTACTGGAAGTTCATTAGAAAGCTCATCATGAATGATCTATTTAACGCCACCGCCATCAACAAGTTGAGACCCTTGAGGACTAGAGAAATCCGCAAGGTTCTTAAGGTTATGGCTCATAGCGCTGATACTCAAGAGCCACTTAATATCACTGATGAACTTCTCAAGTGGACAAACAACACAATATCTATGCTAATGTTGGGTGAGGTTGAAGAGGTTAGAGATATTTCTCGTGATGTTGCTAAGATCTTTGGGGAATACAGTTTCACCAACTTCATTTGGCCATTGAACATGTTTAAGCTTGGGAACTATGAGAAGAGAATTGAGGACATTTTCAATAAATATGATCCTATCATTGAAAAAGTTATCAAGAAACGACGAGAGATTGTGAACAAAAGAAAAGGAAAAAATGGAGATATCCAACAAGATGAGCAAAGTGTAGTTTTTCTTGATACTTTGCTTGAATTTGCTCAAGATGAGACAATGGAGATCAAAATTACAAAGGAACAAATCAAGGGTTTTGTTGTGGATTTCTTCTCTGCTGGGACAGACTCCACAGCTGTGTCAACAGAATGGAGTTTGGCAGAGCTCATCAATAATCCGAGGGTGTTGAAGAAAGCTCGAGAGGAGATTGATTCAGTTGTGGGAAAAGATAGACTTGTTGAAGAGTCGGATGTTCAGAATCTTCCATACATAAGAGCCATGATAAAGGAGGCATTACGCATGCACCCACCAGTACCTGTGGTAAAGAGAAAATGTACGGAAGAATGTGAGATTAACGGATATGTGATCCCTGAAGGAGCATTGATACTTTTCAATGTATGGGCAGTGGGAAGAGACCCAAAATATTGGAACAGACCATTAGAATTCCGTCCTGAGAGGTTCTTAGAGAATGTTGCTGGTGAAGGTGAAGCAGCTTCAGTTGATGTGAGGGGTCAAAATTTCCAACTTTTACCATTTGGGTCTGGAAGGAGGATGTGTCCTGCAGTCAATTTGGCTACTGCAACAATGGCAACACTGCTTGCATCTATTATCCAATGCTTTGATTTGCAAGTACCAAACCTCCATGGAGAAATATTGAAAGGTGATGATGCTAAGGTTAGCATGAAAGAGAGAGCTGGTCTCACAGTTCCAAAAGCACATAATCTCGTATGTGTTCCCCTTGCAAGACCTGGTTTAGCAGCTAAATTGATTTCCTCTTACAACATATAA 1656 0.4058 MVYVKEAINCCSLNLLYQQEAATMLVELALALLVIAFFIHLRPTPTAKSKSLRHLPNPPSPKPRLPFIGHLHLLDNPLLHHCLIRLGQIYGPLYSLYFGSMPTIVVSTPDLFKLFFQTHEATSFNARFQTSAVRRLSYGSSVAMVPFGPYWKFIRKLIMNDLFNATAINKLRPLRTREIRKVLKVMAHSADTQEPLNITDELLKWTNNTISMLMLGEVEEVRDISRDVAKIFGEYSFTNFIWPLNMFKLGNYEKRIEDIFNKYDPIIEKVIKKRREIVNKRKGKNGDIQQDEQSVVFLDTLLEFAQDETMEIKITKEQIKGFVVDFFSAGTDSTAVSTEWSLAELINNPRVLKKAREEIDSVVGKDRLVEESDVQNLPYIRAMIKEALRMHPPVPVVKRKCTEECEINGYVIPEGALILFNVWAVGRDPKYWNRPLEFRPERFLENVAGEGEAASVDVRGQNFQLLPFGSGRRMCPAVNLATATMATLLASIIQCFDLQVPNLHGEILKGDDAKVSMKERAGLTVPKAHNLVCVPLARPGLAAKLISSYNI 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03901 551 Gene3D Cytochrome P450 47 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Vivi2g03901 551 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 FunFam Predicted protein 327 533 - -
Vivi2g03901 551 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 Pfam Cytochrome P450 59 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 SUPERFAMILY Cytochrome P450 52 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03901 551 PANTHER STEROID 21-HYDROXYLASE-RELATED 33 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03901 Vivi-Chr2 151067337 151069847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03901 18 538 Cytochrome P450 AT5G06900 35.714 1.85e-109 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03901 - - ag:BAA76380 807.749