Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03840 ATGAATTTTTTCACTTCATTTTTGTTTCTCTCTTTGATTTCAACTCTCTCTCTTGTGAATTCTGAAACTCTACCTGATAATGAAGTTTGGGCACTTACAAGCTTTAAAGAAGCTATCTATGAAGACCCAAATCTAGCTTTATCAAACTGGAATATGCTAGAGTCAGATCTTTGTAACTGGTTTGGTGTCACTTGCACTGTTTCTGGAGATCATGTCACCAAGTTAAATATATCGGGTTCATCGTTGAAGGGTTTTCTTGCGAGGGAATTGGGGCAAATTACCTATTTGCAAGAACTAGTTTTGCACGGGAACAATCTGATTGGAACTATACCGAAAGAATTGTGCATGTTGAAATCTCTCCAGGTGTTGGATTTGGGAATGAATCACTTGTCTGGACCAATTCCTACGGAGATTGGAAATTTAACTCTACTTGTGAACATAAACCTACAGTCCAACGGGTTGACTGGTAGATTACCTCCTGAGCTTGGAAATTTGAGATACCTTCAAGAACTCTGGCTTGATAGGAACAGGCTTCAAGGACCTATTCCTGCTAGTGGAACTTATAGTTTTGCTTCAACTATGCATGGAATGTATGTTTCAAAAGATAATGCAACTGGCTTGTGCCGTTCACCTCAGTTAAAATTAGCAGACTTTTCATATAACTTTTTAGTCGGTAGCATACCAAAATGCCTGGAGTATCTTCCAAGGATAAGCTTTCAAGGGAACTGCCTCCAGAGCAATGATCCAAAGCAGCGGCCTTCCACACAATGTGGTGGTGCTTCACCTGCCAAGAGTCAGCCAGTAGCGAGCAACCAATACCACCAAATAGCTGATCATGCACGCAAGCATCACGGAACTTCAGAACCTACTTGGCTTTTGGCTTTAGAAATAGTAGCAGGAACTATGGTCGGTTCTCTCTTTCTGGTTGCGGCTCTCGCTACTGTTCAAAGATGTAACAACAAATCTTCTATCATTATTCCTTGGAAAAAATCAGGCAGCCTGAAAGATCACAATGCAGTATATATAGACCCGGATATGTTAAAGGACGTGAGAAGGTATAGCAGACAAGAGCTAGAAGAGGCGTGTGAAGATTTCAGTAACATAATTGGGTCCTCACCGGACAGTGTGGTCTACAAGGGAACTATGAAAGGTGGACCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAGGAGAGTTGGACAGGGTATCTGGAACTCTACTTCCAGAGAGAGGTGGCAGAATTGGCAAAGTTAGACCATGAGAATACTGGAAAACTACTGGGATATTGTAGAGAGAGCAATCCGTTTTCAAGGATGCTGGTTTTTGATTATGCTTCAAATGGGACACTTCACGAGCATTTACATTGTTATGAAGAAGGGTGCCAGTTCTCCTGGACACGGCGTATGAAAATTGTCATAGGCATTGCACGTGGACTCAAGTATTTGCACACAGAAGTTGAACCTCCGTTTACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCCGGTACTATTAGCAGCCAAGGTGCTGTTTGTGTTCTTCCAAACTCTCTTGAGGCACGCCATCTTGATACCAAAGGAAATGTACACGCTTTTGGAGTACTTCTACTAGAGATAATCAGTGGCCGGCTTCCACACTGTAAGGAGAAAGGTTACTTGGTGGATTGGGCGAAAGACTATCTTGAAAAGCCCGAAGTAATGTCACAATTGGTGGATCCAGAACTGAAAAATTTTAGACACGATGATCTCAAAGTGATATGCGAGGTGATAACTCTATGTATCAATCCTGATACAGCTGCCCGTCCATCTATGCGAGAATTATATAGCATGCTGGAGAGCAGAATCGACACATCAGTTAACATAGATCTCAAGTCGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCATAA 1992 0.4172 MNFFTSFLFLSLISTLSLVNSETLPDNEVWALTSFKEAIYEDPNLALSNWNMLESDLCNWFGVTCTVSGDHVTKLNISGSSLKGFLARELGQITYLQELVLHGNNLIGTIPKELCMLKSLQVLDLGMNHLSGPIPTEIGNLTLLVNINLQSNGLTGRLPPELGNLRYLQELWLDRNRLQGPIPASGTYSFASTMHGMYVSKDNATGLCRSPQLKLADFSYNFLVGSIPKCLEYLPRISFQGNCLQSNDPKQRPSTQCGGASPAKSQPVASNQYHQIADHARKHHGTSEPTWLLALEIVAGTMVGSLFLVAALATVQRCNNKSSIIIPWKKSGSLKDHNAVYIDPDMLKDVRRYSRQELEEACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEESWTGYLELYFQREVAELAKLDHENTGKLLGYCRESNPFSRMLVFDYASNGTLHEHLHCYEEGCQFSWTRRMKIVIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGTISSQGAVCVLPNSLEARHLDTKGNVHAFGVLLLEIISGRLPHCKEKGYLVDWAKDYLEKPEVMSQLVDPELKNFRHDDLKVICEVITLCINPDTAARPSMRELYSMLESRIDTSVNIDLKSSSSLAWAELALLS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03840 663 ProSiteProfiles Protein kinase domain profile. 363 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03840 663 Gene3D Ribonuclease Inhibitor 142 276 IPR032675 -
Vivi2g03840 663 FunFam Nuclear pore complex protein NUP107 25 184 - -
Vivi2g03840 663 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Vivi2g03840 663 Gene3D Phosphorylase Kinase; domain 1 338 444 - -
Vivi2g03840 663 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Vivi2g03840 663 Pfam Protein tyrosine and serine/threonine kinase 367 636 IPR001245 GO:0004672|GO:0006468
Vivi2g03840 663 SUPERFAMILY L domain-like 27 237 - -
Vivi2g03840 663 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Vivi2g03840 663 MobiDBLite consensus disorder prediction 245 272 - -
Vivi2g03840 663 PANTHER PROTEIN MALE DISCOVERER 2 9 663 - -
Vivi2g03840 663 Gene3D Transferase(Phosphotransferase) domain 1 445 653 - -
Vivi2g03840 663 SUPERFAMILY Protein kinase-like (PK-like) 344 637 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03840 Vivi-Chr2 150205443 150209433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03840 7 642 Receptor kinase-like Gene Family AT2G35620 29.032 1.59e-58 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vivi2g03840 PK_Tyr_Ser-Thr 8.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03840 - - gmx:100794714 1066.6