LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g03836	ATGGCAGAAGGAAAAGGAAGAGTTTGTGTAACTGGAGGTACAGGTTTTATAGGTTCATGGATCATCAAGAGTCTCCTTGAAAATGGTTACAGTGTTAATACCACTGTTATCCAGAAAAAGAGAGATCTTAGCTTTCTCACAGATCTTCCAGGAGCATCGGAAAAACTAAAAATTTTCAATGCCGATCTTGACAATCCAGAGAGTTTCAATGAAGCAATTGAAGGGTGCGTTGGAATATTCCACACCGCTGCTTCAGTTGATTCTGAAGAGAAGGAACCAGAAGAAATAGTGACAAAAAGAAGTATTAATGGAGCTTTAGAAATTTTAAAAGCATGCAAAAACTCTAAGACAGTAAAGAGAGTTGTTTACACTTCAAGTGCTTCTGCTGTTTATTGTCAAGACAAAGAAAAAGAAAAAGATGTAATGGATGAAAGTTATTGGAGTGATATAGACATTCTTAGAAATTATAAACCATTCGGTTGGGCTTATTCGGTTTCTAAGACACTAGCAGAGAAAGCTGTTCTTGAATATGGACAAGAAAATGGATTGGAAATTGTGACTATTATACCAACTATTGTTGTTGGACCCTTCATTTGCCCTAAGCTTCCTACCTCTGTTTATGGTGTACTACCTTACTTATTTGGTAATACTGCCAACAGTCCAATATCTCGTTTTCATATGGTGCATGTTGATGATGTTGCACGAGCACATATATTCTTACTTGAACATGCTAATCCAAAAGGAAGATACAATTGTTCACCATTCCTTGCAACCGTTGAGGAAGTAGTTGACATTGTTTCTTCAAAGCATCCCGAATTTCAAATTCCAAAGTCCAAATTGCTTGAGGGACCTAAAGGTCTTGAGCTTCCACATTTAACATCAAAAAAACTCACAGATGCTGGATTTGAGTTTAAACATACTATTGAGGAAATGTTTGAGGATGCAATTCAATCTTGCAAAGAAAAAGGTTTCTTTTAA	978	0.363	MAEGKGRVCVTGGTGFIGSWIIKSLLENGYSVNTTVIQKKRDLSFLTDLPGASEKLKIFNADLDNPESFNEAIEGCVGIFHTAASVDSEEKEPEEIVTKRSINGALEILKACKNSKTVKRVVYTSSASAVYCQDKEKEKDVMDESYWSDIDILRNYKPFGWAYSVSKTLAEKAVLEYGQENGLEIVTIIPTIVVGPFICPKLPTSVYGVLPYLFGNTANSPISRFHMVHVDDVARAHIFLLEHANPKGRYNCSPFLATVEEVVDIVSSKHPEFQIPKSKLLEGPKGLELPHLTSKKLTDAGFEFKHTIEEMFEDAIQSCKEKGFF	325

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g03836	325	CDD	FR_SDR_e	8	302	-	-
	Vivi2g03836	325	Gene3D	-	5	325	-	-
	Vivi2g03836	325	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	6	316	-	-
	Vivi2g03836	325	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	6	320	IPR036291	-
	Vivi2g03836	325	FunFam	Dihydroflavonol reductase	5	325	-	-
	Vivi2g03836	325	Pfam	NAD dependent epimerase/dehydratase family	8	252	IPR001509	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g03836	Vivi-Chr2	150152326	150153668	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g03836	4	325	Monolignol Biosynthesis Gene Families	AT2G02400	37.152	2.03e-64	204

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g03836	-		K13265	gmx:102659875	459.914