Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03826 ATGGTTTTTGATTTAGGTAGAAAAAGAAGAGAAATGTTGAAAGTCAAAAAGGAGCTTAAGGATTTTGAATTTGAATCACCTCATCGAGATTTGCTTCATTTATGTCTTTCTTCGCCTAACTGTAATAGCGACACTTGTTTTCTCGAATCAACACCTGTTACAGGGAACAGAAAATCCCAAATTAGCTTGACAAAGAGATTATGGACAGAGGAAGAGGATAATCTTTTGATTGAGACAGTCAAGAAGCATGATGGAAGCAACTGGAAAAATATAGCTGCGTATCTTCCTGGGCGAACTGACGCTCAATGCTTCCATCGTTGGCAAAAGGTTTCAAATCCTGATCTTGTAAAGAGATCATGGACAAAGGAGGAGGATGAGTCCCTAATTGAACTAGTAAGAAAGTATGGTTTCAAGAGATGGTCTTTCATAGCAAAATCCATGCCGGGTCGTATTGGAAAACAATGTCGAGAGAGGTGGCATAATCACCTTGATCCGACTATAAAAAAGGATGCTTGGTCAGAGGAGGAGGAATCAATTCTTGCTCACTATTACCAAATACATGGCAGTAAATGGTCAGAAATTGCTAGGGTTCTTCCTGGAAGGAGTGACAATGCTATAAAAAATCATTGGAACTGCTCAATGAAGAAGAAGTCGTCTGTATCACCAATTAGGTGTGATATGAATGTTTCCACTTCTGGTTTTTGCACTTCAATAAATCCATCACATGATTTGGTTAAAGCTGAAGATCAAAGTTTTAATGGAATTGTTTCTCCCAAGCAAAGACACTGGTTGAAGCACAATGCTAATAACAGTTTTGGTTTGGCAACTCCTAGGGCCTTAGGACTAGGTGAAAGAAGATTGTTTGATTCCCCGAATGAGATGGAAACAGTTATAAGTTGCAAAGACCATGGCCACTCTACGTTGTTTGCTACAGATATGGATTGTTTCCCTTCTTCTGGGACTGTTTCTAATGAGTCCTATAATTCTCCCAAATGGCAAAAGGTTTCTTTTACAGATTCAAAGTTTATTGCTGGTAATGAATCTGATAGTTCCCATTTAAGCTACTTAAAATTGGTTAATCATGAAAAGAAAGTTCATGTTGGAAGGGGAAACAATAGCGAAAGTGACATGAGCCCAGAATGTGTACTAAGAAACTTAGCAATGACCTATGAGAACATTCCTTCTATTATAAGGAAAAGAACTTCTAGGAAGGAATGTAATGCTGCCAATTATGGCAATTCCCAAACACCATCAAGAATTGGCTTAGATAATTTAAATCTCAACCAAGGATTTGTTCCACTTCTTCCTAAACATGGAATGGAATGA 1326 0.3801 MVFDLGRKRREMLKVKKELKDFEFESPHRDLLHLCLSSPNCNSDTCFLESTPVTGNRKSQISLTKRLWTEEEDNLLIETVKKHDGSNWKNIAAYLPGRTDAQCFHRWQKVSNPDLVKRSWTKEEDESLIELVRKYGFKRWSFIAKSMPGRIGKQCRERWHNHLDPTIKKDAWSEEEESILAHYYQIHGSKWSEIARVLPGRSDNAIKNHWNCSMKKKSSVSPIRCDMNVSTSGFCTSINPSHDLVKAEDQSFNGIVSPKQRHWLKHNANNSFGLATPRALGLGERRLFDSPNEMETVISCKDHGHSTLFATDMDCFPSSGTVSNESYNSPKWQKVSFTDSKFIAGNESDSSHLSYLKLVNHEKKVHVGRGNNSESDMSPECVLRNLAMTYENIPSIIRKRTSRKECNAANYGNSQTPSRIGLDNLNLNQGFVPLLPKHGME 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03826 441 CDD SANT 119 163 IPR001005 -
Vivi2g03826 441 Gene3D - 170 230 - -
Vivi2g03826 441 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Vivi2g03826 441 SUPERFAMILY Homeodomain-like 61 116 IPR009057 -
Vivi2g03826 441 Gene3D - 117 168 - -
Vivi2g03826 441 ProSiteProfiles Myb-like domain profile. 60 111 IPR001005 -
Vivi2g03826 441 SUPERFAMILY Homeodomain-like 114 210 IPR009057 -
Vivi2g03826 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 110 IPR017930 -
Vivi2g03826 441 PANTHER MYB PROTEIN-RELATED 65 136 - -
Vivi2g03826 441 Gene3D - 63 116 - -
Vivi2g03826 441 Pfam Myb-like DNA-binding domain 120 178 - -
Vivi2g03826 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 168 218 IPR017930 -
Vivi2g03826 441 ProSiteProfiles Myb-like domain profile. 112 163 IPR001005 -
Vivi2g03826 441 SMART sant 168 216 IPR001005 -
Vivi2g03826 441 SMART sant 64 113 IPR001005 -
Vivi2g03826 441 SMART sant 116 165 IPR001005 -
Vivi2g03826 441 ProSiteProfiles Myb-like domain profile. 164 214 IPR001005 -
Vivi2g03826 441 CDD SANT 171 211 IPR001005 -
Vivi2g03826 441 FunFam Transcriptional activator Myb isoform A 64 116 - -
Vivi2g03826 441 FunFam Transcriptional activator Myb isoform A 117 169 - -
Vivi2g03826 441 CDD SANT 68 110 IPR001005 -
Vivi2g03826 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 167 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03826 Vivi-Chr2 149908594 149911783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03826 55 403 MYB Transcription Factor Family AT3G09370 40.274 1.21e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi2g03826 Myb_DNA-bind_6 5.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03826 - - psat:127120714 776.163