Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03825 ATGGTTTTTGATTTAGGTAGAAAAAGAAGAGAAATGTTGAAAGTCAAAAAGGAGCTTAAGGATTTTGAATTTGAATCACCTCATCGAGATTTGCTTCATTTATGTCTTTCTTCGCCTAACTGTAATAGCGACACTTGTTTTCTCGAATCAACACCTGTTACAGGAAAATCCCAAATTAGCTTGACAAAGAGATTATGGACAGAGGAAGAGGATAATCTTTTGATTGAGACAGTCAAGAAGCATGATGGAAGCAACTGGAAAAATATAGCTGCGTATCTTCCTGGGCGAACTGACGCTCAATGCTTCCATCGTTGGCAAAAGGTTTCAAATCCTGATCTTGTAAAGAGATCATGGACAAAGGAGGAGGATGAGTCCCTAATTGAACTAGTAAGAAAGTATGGTTTCAAGAGATGGTCTTTCATAGCAAAATCCATGCCGGGTCGTATTGGAAAACAATGTCGAGAGAGGTGGCATAATCACCTTGATCCGACTATAAAAAAGGATGCTTGGTCAGAGGAGGAGGAATCAATTCTTGCTCACTATTACCAAATACATGGCAGTAAATGGTCAGAAATTGCTAGGGTTCTTCCTGGAAGGAGTGACAATGCTATAAAAAATCATTGGAACTGCTCAATGAAGAAGAAGTCGTCTGTATCACCAATTAGGTGTGATATGAATGTTTCCACTTCTGGTTTTTGCACTTCAATAAATCCATCACATGATTTGGTTAAAGCTGAAGATCAAAGTTTTAATGGAATTGTTTCTCCCAAGCAAAGACACTGGTTGAAGCACAATGCTAATAACAGTTTTGGTTTGGCAACTCCTAGGGCCTTAGGACTAGGTGAAAGAAGATTGTTTGATTCCCCGAATGAGATGGAAACAGTTATAAGTTGCAAAGACCATGGCCACTCTACGTTGTTTGCTACAGATATGGATTGTTTCCCTTCTTCTGGGACTGTTTCTAATGAGTCCTATAATTCTCCCAAATGGCAAAAGGTTTCTTTTACAGATTCAAAGTTTATTGCTGGTAATGAATCTGATAGTTCCCATTTAAGCTACTTAAAATTGGTTAATCATGAAAAGAAAGTTCATGTTGGAAGGGGAAACAATAGCGAAAGTGACATGAGCCCAGAATGTGTACTAAGAAACTTAGCAATGACCTATGAGAACATTCCTTCTATTATAAGGAAAAGAACTTCTAGGAAGGAATGTAATGCTGCCAATTATGGCAATTCCCAAACACCATCAAGAATTGGCTTAGATAATTTAAATCTCAACCAAGGATTTGTTCCACTTCTTCCTAAACATGGAATGGAATGA 1320 0.3795 MVFDLGRKRREMLKVKKELKDFEFESPHRDLLHLCLSSPNCNSDTCFLESTPVTGKSQISLTKRLWTEEEDNLLIETVKKHDGSNWKNIAAYLPGRTDAQCFHRWQKVSNPDLVKRSWTKEEDESLIELVRKYGFKRWSFIAKSMPGRIGKQCRERWHNHLDPTIKKDAWSEEEESILAHYYQIHGSKWSEIARVLPGRSDNAIKNHWNCSMKKKSSVSPIRCDMNVSTSGFCTSINPSHDLVKAEDQSFNGIVSPKQRHWLKHNANNSFGLATPRALGLGERRLFDSPNEMETVISCKDHGHSTLFATDMDCFPSSGTVSNESYNSPKWQKVSFTDSKFIAGNESDSSHLSYLKLVNHEKKVHVGRGNNSESDMSPECVLRNLAMTYENIPSIIRKRTSRKECNAANYGNSQTPSRIGLDNLNLNQGFVPLLPKHGME 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03825 439 ProSiteProfiles Myb-like domain profile. 162 212 IPR001005 -
Vivi2g03825 439 SMART sant 166 214 IPR001005 -
Vivi2g03825 439 SMART sant 114 163 IPR001005 -
Vivi2g03825 439 SMART sant 62 111 IPR001005 -
Vivi2g03825 439 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 216 IPR017930 -
Vivi2g03825 439 SUPERFAMILY Homeodomain-like 59 114 IPR009057 -
Vivi2g03825 439 CDD SANT 169 209 IPR001005 -
Vivi2g03825 439 SUPERFAMILY Homeodomain-like 112 208 IPR009057 -
Vivi2g03825 439 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 165 IPR017930 -
Vivi2g03825 439 PANTHER MYB PROTEIN-RELATED 65 134 - -
Vivi2g03825 439 Pfam Myb-like DNA-binding domain 65 107 IPR001005 -
Vivi2g03825 439 Gene3D - 168 228 - -
Vivi2g03825 439 ProSiteProfiles Myb-like domain profile. 110 161 IPR001005 -
Vivi2g03825 439 CDD SANT 66 108 IPR001005 -
Vivi2g03825 439 Gene3D - 61 114 - -
Vivi2g03825 439 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Vivi2g03825 439 CDD SANT 117 161 IPR001005 -
Vivi2g03825 439 FunFam Transcriptional activator Myb isoform A 115 167 - -
Vivi2g03825 439 FunFam Transcriptional activator Myb isoform A 62 114 - -
Vivi2g03825 439 Pfam Myb-like DNA-binding domain 118 176 - -
Vivi2g03825 439 Gene3D - 115 166 - -
Vivi2g03825 439 ProSiteProfiles Myb-like domain profile. 58 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03825 Vivi-Chr2 149908594 149911784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03825 59 401 MYB Transcription Factor Family AT3G09370 40.669 2.56e-72 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi2g03825 Myb_DNA-bind_6 5.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03825 - - psat:127120714 766.918