Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03823 ATGGCGGCATTACCGGTGGAGCAAACAGGTGAATCACCGACGATGGAATCGCAGAGATCCATTCCGACGCCGTTTCTGACCAAAACATACCAACTCGTGGATGATCCTTCTGTTGATGATTTGATTTCGTGGAACGAAGATGGCACAAGCTTCATAGTTTGGTTACCGGCTGAATTCGCAAGAGATTTGTTACCGAAGTATTTCAAGCATAACAACTTCTCCAGTTTCGTTCGTCAGCTTAATACTTATGGATTTCGGAAAGTTGTGCCTGACCGTTGGGAATTTGCGAACGACGGTTTCCGACGAGGCGAGAAGAATCTACTCCGTGATATACAGCGGCGGAAAATATTGTCGGCGGCGGGGACGCCGGTTGTGACTACGACGGTAGCTGCGGCGACTAATGTTGTAACGGTAGCTATGGCGGCACCGGTGAGAATGGTGTCTCCAACAACTTCTGGTGATGAACAGGTTGTTTCATCGAACTCATCTCCGATTGTGACGCACAATAGTACTACAGTGCACCGCAGCACTACTTCGCCTGAATTATTTGAAGAGAATGAAAGGCTTAAGAAAGAGAATATGCAACTGAATAACGAGTTGGGTCAATTGAAAAGTCTTTGTAATAGTATACTGTCTATGATGAGTAATTATGCTTCTGGTTTTAGTCGTCAGTTAGAGTCATCTACTAGCGCCGCAACGGCACGGGCTGTGCTTGTAACAGAAGGAGGGAAAGCGTTGGATCTGTTGCATACAAGGAATGTTTCGTTGGCTGAGGAGGCTGTGGCTGTTAATGTGGGTGGTGCTGCGGGTGGCGCATCGTGTGAGACAGCGAATTTGGCTGGTGTTGGTGGTGGTGCATCTTGTGAGACCACGAATTTGGCTGAACCTGAACCTGAGAATGAGCATGGGGCTCAAGTTCCTAAACTGTTTGGGGTTTCTATTGGGCTTAAACGATGTAGGAGAGAGAGTGAGGCTGAACCGGAGAGAGAGGAACGGGAACAGCATCAAACGCCAATGCAAATGCAGATCCAAACACAATCCTCTCGTGAACATGATCAGCATCAAATGCAAATGCACATGCAGATTCAAACACAATCCTCTCATGAACATGATCAGCATCAAACGCCAATGCAAATGCAGATGCAAACACAATCCTCTCATGAACATGATCGAGGATCAGATGTGAAATCTGAACCGCATGATGGTAACGATGACTCGGATGATCAAGAGCATTGTTGGGATTTGATGAAATAG 1254 0.4673 MAALPVEQTGESPTMESQRSIPTPFLTKTYQLVDDPSVDDLISWNEDGTSFIVWLPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDGFRRGEKNLLRDIQRRKILSAAGTPVVTTTVAAATNVVTVAMAAPVRMVSPTTSGDEQVVSSNSSPIVTHNSTTVHRSTTSPELFEENERLKKENMQLNNELGQLKSLCNSILSMMSNYASGFSRQLESSTSAATARAVLVTEGGKALDLLHTRNVSLAEEAVAVNVGGAAGGASCETANLAGVGGGASCETTNLAEPEPENEHGAQVPKLFGVSIGLKRCRRESEAEPEREEREQHQTPMQMQIQTQSSREHDQHQMQMHMQIQTQSSHEHDQHQTPMQMQMQTQSSHEHDRGSDVKSEPHDGNDDSDDQEHCWDLMK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03823 417 MobiDBLite consensus disorder prediction 1 20 - -
Vivi2g03823 417 FunFam Heat stress transcription factor B-4 17 115 - -
Vivi2g03823 417 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Vivi2g03823 417 MobiDBLite consensus disorder prediction 315 336 - -
Vivi2g03823 417 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Vivi2g03823 417 MobiDBLite consensus disorder prediction 337 386 - -
Vivi2g03823 417 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Vivi2g03823 417 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Vivi2g03823 417 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Vivi2g03823 417 MobiDBLite consensus disorder prediction 285 417 - -
Vivi2g03823 417 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Vivi2g03823 417 MobiDBLite consensus disorder prediction 150 179 - -
Vivi2g03823 417 Coils Coil 179 206 - -
Vivi2g03823 417 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Vivi2g03823 417 MobiDBLite consensus disorder prediction 387 417 - -
Vivi2g03823 417 MobiDBLite consensus disorder prediction 150 182 - -
Vivi2g03823 417 Gene3D - 17 115 IPR036388 -
Vivi2g03823 417 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 385 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03823 Vivi-Chr2 149893400 149895636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03823 1 218 HSF AT5G62020 58.036 1.60e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Vivi2g03823 HSF_DNA-bind 3.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03823 K09419 - gmx:100791020 411.764