Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03821 ATGGAGAGACAAAATATTGCGTATCAAATTCTGGTTGATCGGTGTCGGAGCTTGGAGGAGAAACAAGTGAAATTAACGGAGCAGTTCAATGAGTTGATGCAGGAGAAGGTCAAAGACGATGAAGATTATTCAGCCGCTGGTTTCTTTTCCGGTTTCTTCTTCTCTATAAGTCCATATGCTAATGTTTTGAAATGCATGGGACATGCCGTTCATATCCATAGAGTTTCCTCCGGCGAGATCATATACTGGAATGATTCGGCAGAAACTCTATATGGATGGAGGGAGAATGAGATAATTGGACAAAGAGTAGCGGATTTCCTAGTTGCTGAGGAATATTACGCATCTCTACGAAAAATTCTACAACACTTGATCACAGGAGTGCCGTGGTCTGGGCAGTTTCCTTTCAAGAAGAGGTCTGGTGAAATATTTATGGCAATGGTAACAAAAACTCCTTTTTACGAAGGCGGCGAGCTTGTTGGTGTCATCACTGTTTCTAGTGATGCATCTGTATTTAACTCTAAGGGTTTCGAAGAACGAAGAACTTGCCAATCTCGTGTGAAGGACCAACCGGGAATTCAAAGGTTAAAAAGGATTCAGTGGCCTCCACGTCCACAAATTGCATCATCTGTTCCTAATGTGGCAGCTAGAGTCCTTGCTAAGCTTCGAAGTGGGAGAGGTGGAGAACAAAGGAAGGATACTAGAAGTATTAAAGATAATTGCACAACTGATGATAATTCAGGAAATCCAAAAATTTCTGCACATGGAACTTCTAGTGATCTCAGAGATAGTTCAGCTAAACCATTCTCAAAGGACTGTTGTGAATGTTCTGGTTCTCCCTATCCCGAAGACCCTTTGTTAAGATTACGCTGTCCGTTCAATCCAAAGAAATTGGAGCCAGAAGCAATGAATAAGGATGAAGTGCAAAAGCAACAAGAAGGGTTGCCGTTGGCGAGCTCGAAGGAGAGTATTGGTGACAATCCGAGTTCATCAAGCAAAGAGAAAGGTGAATCAAACTCTATTGTAGAGTGTGATATCCATTGGGAAGACCTTCAATTAAGAAAAGAGATTGGGCAAGGTTCTTATGCTGTTGTTTATCATGGAATTTGGAATGCGTCGGATGTTGCTGTCAAGGTTTACTTTGGGAATGGATATGCTGAGGAGACTTTAAGAGACTACAAAAAAGAGGTTGATATAATGAAAAGATTGAGACACCCTAATGTATTGCTTTTCATGGGAGCAATCTATTCTCAGGAAAGGCATGCCATTGTGACAGAGTTGTTACCTAGAGGAAGCCTTTTCAGAACACTTCACAAGAACAATCAAACATTTGACATCAGAAGGCATCTTAGAATGGCTCTTGATGTTGCTAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATAGTGCATAGAGACCTAAAATCTTCCAACCTGCTTGTTGATAAAAACTGGAATGTCAAGGTTGGAGACTTTGGCTTGTCGAAGTTGAAGGAAGCAACTTTATTGACTACCAAATCCGGAAGAGGAACCTTTTATTGTTCTCTCTGTCAAATGCAGCCTCAATGGATGGCCCCTGAAGTTCTCCGCAGTGAACCTTCAAATGAAAAGTCCGATGTGTTCAGCTATGGCGTCGTCCTATGGGAAATAATGACTCAATCTATTCCATGGAAAAATTTGAATTCCTTACAGGTTGTTGGAGTAGTAGGCTTTATGAATAGAAGACTGGACCTACCGGAGGGGCTGGATCCCCATGTAGCTTCAATCATAAATGACTGCTGGCAAAGTGATCCAGAACAACGACCATCATTTGAAGAGCTAGTGCAGAGAATGATGTTGATTCTCAACAGAGTAACAACTTTGTCATTGAAGAGAATTGCAGAATCCTGA 1890 0.4143 MERQNIAYQILVDRCRSLEEKQVKLTEQFNELMQEKVKDDEDYSAAGFFSGFFFSISPYANVLKCMGHAVHIHRVSSGEIIYWNDSAETLYGWRENEIIGQRVADFLVAEEYYASLRKILQHLITGVPWSGQFPFKKRSGEIFMAMVTKTPFYEGGELVGVITVSSDASVFNSKGFEERRTCQSRVKDQPGIQRLKRIQWPPRPQIASSVPNVAARVLAKLRSGRGGEQRKDTRSIKDNCTTDDNSGNPKISAHGTSSDLRDSSAKPFSKDCCECSGSPYPEDPLLRLRCPFNPKKLEPEAMNKDEVQKQQEGLPLASSKESIGDNPSSSSKEKGESNSIVECDIHWEDLQLRKEIGQGSYAVVYHGIWNASDVAVKVYFGNGYAEETLRDYKKEVDIMKRLRHPNVLLFMGAIYSQERHAIVTELLPRGSLFRTLHKNNQTFDIRRHLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWNVKVGDFGLSKLKEATLLTTKSGRGTFYCSLCQMQPQWMAPEVLRSEPSNEKSDVFSYGVVLWEIMTQSIPWKNLNSLQVVGVVGFMNRRLDLPEGLDPHVASIINDCWQSDPEQRPSFEELVQRMMLILNRVTTLSLKRIAES 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03821 629 NCBIfam PAS domain S-box protein 76 167 IPR000014 -
Vivi2g03821 629 ProSiteProfiles Protein kinase domain profile. 350 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03821 629 MobiDBLite consensus disorder prediction 312 336 - -
Vivi2g03821 629 FunFam Serine/threonine-protein kinase isoform 1 341 428 - -
Vivi2g03821 629 MobiDBLite consensus disorder prediction 223 239 - -
Vivi2g03821 629 Pfam PAS domain 76 167 IPR000014 -
Vivi2g03821 629 SUPERFAMILY Protein kinase-like (PK-like) 340 620 IPR011009 -
Vivi2g03821 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Vivi2g03821 629 MobiDBLite consensus disorder prediction 221 264 - -
Vivi2g03821 629 Gene3D Phosphorylase Kinase; domain 1 343 427 - -
Vivi2g03821 629 MobiDBLite consensus disorder prediction 240 263 - -
Vivi2g03821 629 Coils Coil 1 35 - -
Vivi2g03821 629 CDD PAS 78 167 IPR000014 -
Vivi2g03821 629 SMART serkin_6 350 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03821 629 SMART pas_2 57 125 IPR000014 -
Vivi2g03821 629 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 241 612 - -
Vivi2g03821 629 ProSiteProfiles PAS repeat profile. 77 127 IPR000014 -
Vivi2g03821 629 Gene3D Transferase(Phosphotransferase) domain 1 428 626 - -
Vivi2g03821 629 MobiDBLite consensus disorder prediction 300 337 - -
Vivi2g03821 629 PRINTS Tyrosine kinase catalytic domain signature 582 604 IPR001245 GO:0004672|GO:0006468
Vivi2g03821 629 PRINTS Tyrosine kinase catalytic domain signature 463 481 IPR001245 GO:0004672|GO:0006468
Vivi2g03821 629 PRINTS Tyrosine kinase catalytic domain signature 424 437 IPR001245 GO:0004672|GO:0006468
Vivi2g03821 629 PRINTS Tyrosine kinase catalytic domain signature 538 560 IPR001245 GO:0004672|GO:0006468
Vivi2g03821 629 FunFam PAS domain-containing protein tyrosine kinase family protein 428 627 - -
Vivi2g03821 629 Gene3D PAS domain 75 171 - -
Vivi2g03821 629 SUPERFAMILY PYP-like sensor domain (PAS domain) 61 167 IPR035965 -
Vivi2g03821 629 Pfam Protein tyrosine and serine/threonine kinase 350 610 IPR001245 GO:0004672|GO:0006468
Vivi2g03821 629 CDD STKc_MAP3K-like 356 611 - -
Vivi2g03821 629 ProSitePatterns Protein kinases ATP-binding region signature. 356 377 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03821 Vivi-Chr2 149846598 149850367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03821 343 617 MAP Kinase Kinase Kinase AT4G23050 69.091 1.49e-137 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vivi2g03821 PK_Tyr_Ser-Thr 4.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03821 - - vvo:131647034 1240.33