LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g03820	ATGGAGAGACAAAATATTGCGTATCAAATTCTGGTTGATCGGTGTCGGAGCTTGGAGGAGAAACAAGTGAAATTAACGGAGCAGTTCAATGAGTTGATGCAGGAGAAGGTCAAAGACGATGAAGATTATTCAGCCGCTGGTTTCTTTTCCGGTTTCTTCTTCTCTATAAGTCCATATGCTAATGTTTTGAAATGCATGGGACATGCCGTTCATATCCATAGAGTTTCCTCCGGCGAGATCATATACTGGAATGATTCGGCAGAAACTCTATATGGATGGAGGGAGAATGAGATAATTGGACAAAGAGTAGCGGATTTCCTAGTTGCTGAGGAATATTACGCATCTCTACGAAAAATTCTACAACACTTGATCACAGGAGTGCCGTGGTCTGGGCAGTTTCCTTTCAAGAAGAGGTCTGGTGAAATATTTATGGCAATGGTAACAAAAACTCCTTTTTACGAAGGCGGCGAGCTTGTTGGTGTCATCACTGTTTCTAGTGATGCATCTGTATTTAACTCTAAGGGTTTCGAAGAACGAAGAACTTGCCAATCTCGTGTGAAGGACCAACCGGGAATTCAAAGGTTAAAAAGGATTCAGTGGCCTCCACGTCCACAAATTGCATCATCTGTTCCTAATGTGGCAGCTAGAGTCCTTGCTAAGCTTCGAAGTGGGAGAGGTGGAGAACAAAGGAAGGATACTAGAAGTATTAAAGATAATTGCACAACTGATGATAATTCAGGAAGTAATAGAATGAATAATGGAAATGATTTATCTGGAAGTTCAGTTGAATTAACCATGCACCAGGATATTTCTAATGGAGAAGATAAAGAAGGAAATCTCCAAAAATGTAATTCTTTATTTGATGTAAATATAACAGATCCAAAAATTTCTGCACATGGAACTTCTAGTGATCTCAGAGATAGTTCAGCTAAACCATTCTCAAAGGACTGTTGTGAATGTTCTGGTTCTCCCTATCCCGAAGACCCTTTGTTAAGATTACGCTGTCCGTTCAATCCAAAGAAATTGGAGCCAGAAGCAATGAATAAGGATGAAGTGCAAAAGCAACAAGAAGGGTTGCCGTTGGCGAGCTCGAAGGAGAGTATTGGTGACAATCCGAGTTCATCAAGCAAAGAGAAAGGTGAATCAAACTCTATTGTAGAGTGTGATATCCATTGGGAAGACCTTCAATTAAGAAAAGAGATTGGGCAAGGTTCTTATGCTGTTGTTTATCATGGAATTTGGAATGCGTCGGATGTTGCTGTCAAGGTTTACTTTGGGAATGGATATGCTGAGGAGACTTTAAGAGACTACAAAAAAGAGGTTGATATAATGAAAAGATTGAGACACCCTAATGTATTGCTTTTCATGGGAGCAATCTATTCTCAGGAAAGGCATGCCATTGTGACAGAGTTGTTACCTAGAGGAAGCCTTTTCAGAACACTTCACAAGAACAATCAAACATTTGACATCAGAAGGCATCTTAGAATGGCTCTTGATGTTGCTAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATAGTGCATAGAGACCTAAAATCTTCCAACCTGCTTGTTGATAAAAACTGGAATGTCAAGGTTGGAGACTTTGGCTTGTCGAAGTTGAAGGAAGCAACTTTATTGACTACCAAATCCGGAAGAGGAACCTTTTATTGTTCTCTCTGTCAAATGCAGCCTCAATGGATGGCCCCTGAAGTTCTCCGCAGTGAACCTTCAAATGAAAAGTCCGATGTGTTCAGCTATGGCGTCGTCCTATGGGAAATAATGACTCAATCTATTCCATGGAAAAATTTGAATTCCTTACAGGTTGTTGGAGTAGTAGGCTTTATGAATAGAAGACTGGACCTACCGGAGGGGCTGGATCCCCATGTAGCTTCAATCATAAATGACTGCTGGCAAAGTGATCCAGAACAACGACCATCATTTGAAGAGCTAGTGCAGAGAATGATGTTGATTCTCAACAGAGTAACAACTTTGTCATTGAAGAGAATTGCAGAATCCTGA	2025	0.4054	MERQNIAYQILVDRCRSLEEKQVKLTEQFNELMQEKVKDDEDYSAAGFFSGFFFSISPYANVLKCMGHAVHIHRVSSGEIIYWNDSAETLYGWRENEIIGQRVADFLVAEEYYASLRKILQHLITGVPWSGQFPFKKRSGEIFMAMVTKTPFYEGGELVGVITVSSDASVFNSKGFEERRTCQSRVKDQPGIQRLKRIQWPPRPQIASSVPNVAARVLAKLRSGRGGEQRKDTRSIKDNCTTDDNSGSNRMNNGNDLSGSSVELTMHQDISNGEDKEGNLQKCNSLFDVNITDPKISAHGTSSDLRDSSAKPFSKDCCECSGSPYPEDPLLRLRCPFNPKKLEPEAMNKDEVQKQQEGLPLASSKESIGDNPSSSSKEKGESNSIVECDIHWEDLQLRKEIGQGSYAVVYHGIWNASDVAVKVYFGNGYAEETLRDYKKEVDIMKRLRHPNVLLFMGAIYSQERHAIVTELLPRGSLFRTLHKNNQTFDIRRHLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWNVKVGDFGLSKLKEATLLTTKSGRGTFYCSLCQMQPQWMAPEVLRSEPSNEKSDVFSYGVVLWEIMTQSIPWKNLNSLQVVGVVGFMNRRLDLPEGLDPHVASIINDCWQSDPEQRPSFEELVQRMMLILNRVTTLSLKRIAES	674

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vivi2g03820	674	MobiDBLite	consensus disorder prediction	240	260	-	-
Vivi2g03820	674	Pfam	Protein tyrosine and serine/threonine kinase	395	655	IPR001245	GO:0004672\|GO:0006468
Vivi2g03820	674	MobiDBLite	consensus disorder prediction	357	381	-	-
Vivi2g03820	674	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	514	526	IPR008271	GO:0004672\|GO:0006468
Vivi2g03820	674	SUPERFAMILY	Protein kinase-like (PK-like)	385	665	IPR011009	-
Vivi2g03820	674	MobiDBLite	consensus disorder prediction	223	239	-	-
Vivi2g03820	674	ProSitePatterns	Protein kinases ATP-binding region signature.	401	422	IPR017441	GO:0005524
Vivi2g03820	674	FunFam	Serine/threonine-protein kinase isoform 1	386	473	-	-
Vivi2g03820	674	Pfam	PAS domain	76	167	IPR000014	-
Vivi2g03820	674	Coils	Coil	1	35	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g03820	Vivi-Chr2	149846597	149850367	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g03820	388	662	MAP Kinase Kinase Kinase	AT4G23050	69.091	3.41e-137	417

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-2	Vivi2g03820		PK_Tyr_Ser-Thr	5.3e-65	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g03820	-		-	vvo:131647034	1357.81

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